Gene Slin_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1584 
Symbol 
ID8725318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1913964 
End bp1914428 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003386432 
Protein GI284036502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.209159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.209108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACCA CCGGTCAGAA AGCCCCAGAG TTTACCCTTT TCAGCAGCGA TAAAAAAGAA 
GTATCGCTGG CCGATTTCAA AGGCAAGAAT GTTGTCATTC TCTTTTTTCC AATGGCTTTT
ACAAGCGTTT GTACTGCCGA ACTTTGTGAA ATGCGCGACA ACATCAGTGT TTATTCAAGT
CTGAATGCTG AAATCCTCGG TATTTCGGTT GATTCACCCT TTACACTGGC AAAGTTCAGA
GAGGAGCAGA ATTTACCGTT CCCATTGCTG TCAGATTTTA ACAAAGAAGT TTCACAGGCA
TATGACACCT ACTACGAAAC GTTTGTAATG AACCTAAAGG GCGTAAGCAA ACGCTCCGCT
TTCGTGGTCG ATAAAGATGG CAACATCCAG TATGCCGAAG TTCTGGAAAG TGCCGGTGAT
GTGCCTAATT TCCAGGCCGT ACAGGAAACG CTTAAAGGAA TGTAA
 
Protein sequence
MLTTGQKAPE FTLFSSDKKE VSLADFKGKN VVILFFPMAF TSVCTAELCE MRDNISVYSS 
LNAEILGISV DSPFTLAKFR EEQNLPFPLL SDFNKEVSQA YDTYYETFVM NLKGVSKRSA
FVVDKDGNIQ YAEVLESAGD VPNFQAVQET LKGM