Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1577 |
Symbol | |
ID | 8725311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1906374 |
End bp | 1907090 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386425 |
Protein GI | 284036495 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.026846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00608034 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACCGA TGAATAAGTG TATAGTGAAT GAATGTGAAC GAAGTGCCAA AGCCTTAGGA TACTGCTCTG CACACTATGA AAGACTCAAA AAAGGCTCTG GACTAAATCC AGCTAAACCA ATAAGGAAAT CTGCTGTATC TGTAACAGAT GAAGAATTAC GGGATGCGGT TAAACTAACG AAAAGCTGGC GGGGCCTATT AAACTATTTA GGGTTCGCAA CAATGTCTGG TGCCAGGAAA GCAATTCAAA ACCGCGTTAA AAAGCTTGGC TTAGATATTT CACACTATCC TATTCAGAAT CCCCGTGTTA AGTGTCTAAT AGAAGGATGT ACAGAATTAA ATCACAGTAA AGATTATTGT TTACGCCATT ATGGATTTTT GAAGAGAAAT GGCGATCCAT TAAAAATAAT CATAACGGGC AAAAGACGAT ACGATGCTTA TGGCTATATC ATGCTTGACC GTAAAGACCA CCCCTTCGTT ACATCCAAAA CGGGCAGAAT TTTTGAGCAT AGACTGATTA TGTCTGAGAA GCTTGGGAGG GCTTTATTAA CTGATGAACA AGTCCATCAT AAAAACTCTC AAAGGCAAGA CAATCGCATA GACAATTTAG AATTATGGTC TACCAATCAG CCCATTGGTG GACGTGTGAA GGATTTAATT AAATGGGCCA AAGAGATACT AGCCATATAT GGTGACGATG AGACCAAATA TGGCTAG
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Protein sequence | MRPMNKCIVN ECERSAKALG YCSAHYERLK KGSGLNPAKP IRKSAVSVTD EELRDAVKLT KSWRGLLNYL GFATMSGARK AIQNRVKKLG LDISHYPIQN PRVKCLIEGC TELNHSKDYC LRHYGFLKRN GDPLKIIITG KRRYDAYGYI MLDRKDHPFV TSKTGRIFEH RLIMSEKLGR ALLTDEQVHH KNSQRQDNRI DNLELWSTNQ PIGGRVKDLI KWAKEILAIY GDDETKYG
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