| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1538 |
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| Symbol | |
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| ID | 8725272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1856463 |
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| End bp | 1857170 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_003386386 |
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| Protein GI | 284036456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0431142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.14512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC TTATCTACAA TCACTTCGAT CGGGAGGTAC ACCCGCCTTA TCTGTCCCCG
GAGTACAAAT CAACGGTGCT AAGGGCACCG TCAAAACCGC TGATTGTTAT TAAACAGTCG
CTTTCGGAGC TGACCGGTCC GGTTTTCGGG GAAGCCCATG TCGGTCCGCT TGATCATGAT
CTGACGAAAA ATTCCGTTCG AAACGGCGAA CCTCTGGGCG AACGGATCAT TGTGCATGGT
AAGGTCATGG ACGAAAACGG GCGTCCCATT CCGCACACGC TGATCGAGAT CTGGCAGGCC
AATTCGGCGG GTCGGTACGT GCATAAAGTT GACCAGCACG ACGCACCCAT TGACCCTAAT
TTTCTGGGAA CGGGCCGCGT ACTAACCGAT GCCGACGGGC ACTACCGGTT TTATACCATA
AAGCCGGGGG CGTATCCGTG GGGCAACCAT TACAACGCCT GGCGGCCCAA CCACATTCAC
TTTTCGCTGT TCGGCCCGAA TATCACGACG CGTCTGGTTA CGCAGATGTA CTTTCCCGGC
GACCCGCTGC TGGAGTATGA CCCGGTCTTT CTGGGCGTTC CCCCCAAAGG CCGGGAGTTG
TTGATTTCGC AGTTCGACCT GAGCGTTACC GAACCCCATT TCGCCCTGGG CTACCGGTTC
GATTTTGTGC TGAGAGGGCA CAACTCAACA CCATTTGAAA CGGCTTAA
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| Protein sequence | MSELIYNHFD REVHPPYLSP EYKSTVLRAP SKPLIVIKQS LSELTGPVFG EAHVGPLDHD
LTKNSVRNGE PLGERIIVHG KVMDENGRPI PHTLIEIWQA NSAGRYVHKV DQHDAPIDPN
FLGTGRVLTD ADGHYRFYTI KPGAYPWGNH YNAWRPNHIH FSLFGPNITT RLVTQMYFPG
DPLLEYDPVF LGVPPKGREL LISQFDLSVT EPHFALGYRF DFVLRGHNST PFETA
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