Gene Slin_1520 details

Gene Information

• Locus tag: Slin_1520
• ID: 8725254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 1834362
• End bp: 1834982
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 47%
• Product: GrpE protein
• Protein accession: YP_003386369
• Protein GI: 284036439

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0812159
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.974035
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAATA AAGACATTTT GGATGAACAG GCATCCGGCG ATCCGCAACA ACCTGACAAC 
CTGACAACTG AAAACGTGAC AGAAGAAGAA GCCGTAACGG TAAATGGTGG TGAACCAGCC 
GAAAACGAAA CAGTTCCGTC GTCGGACGAT CCGTCGGCTG AAACTGCAAC GGCAGAACGC 
GATAAGGCCG GCAGTGAATT GGCCGAACTG AAAGATAAAT ATCTCCGTTT ATACGCTGAT 
TTTGAGAACT TCCGTCGGCG AACGGCCAAG GAAAAACTTG AGTTGATCAG CAACGCCAAC 
GAAGGCGTAT TGAAGGCACT GATTCCGGTT GTCGACGATT TTGAGCGGGC GATGCAATCT 
ATCGAAAGCA CCAATGACGT GGCGGCTCTG AAAGAAGGCG TGTCATTGAT TTATAACAAA 
TTATTCAAGA CACTGGAAGG TAAAGGGCTA AAGCCAATGA TCTCGAAAGG AGAGACCTTC 
AACGCCGATC TGCACGAATC CGTTACTCAG TTTCCGGCAC CCAGCGATGA CCTCAAAGGC 
AAAGTGATTG ACGAAATAGA AAAAGGATAC TACCTGAATG ATAAAGTCAT TCGGTTTGCA 
AAAGTGATTG TAGGAAGCTA A 

 

Protein sequence

MENKDILDEQ ASGDPQQPDN LTTENVTEEE AVTVNGGEPA ENETVPSSDD PSAETATAER 
DKAGSELAEL KDKYLRLYAD FENFRRRTAK EKLELISNAN EGVLKALIPV VDDFERAMQS 
IESTNDVAAL KEGVSLIYNK LFKTLEGKGL KPMISKGETF NADLHESVTQ FPAPSDDLKG 
KVIDEIEKGY YLNDKVIRFA KVIVGS