Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1493 |
Symbol | |
ID | 8725227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1807687 |
End bp | 1808640 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | phospholipase/Carboxylesterase |
Protein accession | YP_003386342 |
Protein GI | 284036412 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.030471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGTT TAATTCTCGT CGCGCTAGCT TTTGGATTGA ATTTATCAAC CCGCGAGGCC ACTCCCGTAC AAGAGCGACC TCCGTTGTTT ATTTCAGCCC TGGCCAGCAC CCGCGACACG CTTTGGCATC AGGGACAAAC CCGAATTTAC TGGGTTCATA TACCACCAGC CTACGCCAAA ACCGACACTT CCCTGCCGCT CGTGGTAGCC CTGCACGGTG GTGGCGGTAG CGGTCAGCAG TTTGAAGCCC AGTCGAAACT GAGCGAAAAA GCGGATAAGG AAGGATTTAT TGTGGTGTAT CCCGATGGTC TACAAAATCC GGGTGTTTTG AAGTTACGCA CCTGGAATGC GGGTAACTGC TGCGGCCAGA TTGCCTCGGT AAAACAGACC GACGATGTGG GCTTTATCCG AAAACTCATT GATAAACTAA CGACAACCTA CCGGATCGAC CCGAAACGGG TGTATGCTAC CGGGCATTCC AATGGGGCCA TGCTCTGCTA CCGGCTGGCC TGCGAATTCC CCGACAAACT GGCAGCGATT GCAGCCAATG CCGGAACCAT GCAACTAAAA ACCACCTGCC AACCCTCCCG TGTTTTGTCA ATTTTGCACA TTCATTCCCG GCAGGATAAT AATGTGCCGT ATACCGGCGG CATCGGCTCC AGAAGCCTCA ACAAACAGTG GAACGCTCCG GTCGACAGCA CGCTGGCCGT GTTTGCCAAA CTAGCGGGAT GTACTCCCGA AAAGCCAACA ACAAAAACAG CCGGTTTGTA TACATCGTAC ACCTGGACGG GTTGCCGGGA CGACGTTGCT ATTCAGTACT ACCTAACCAC CGATGGCGGC CACGCCTGGC CCGGTGGCCA AAAAGGAGCC CGCTTCATTG GCGATGCTCC CTCCGAAGCC TTTTCGAACA ACGATGTAAT CTGGGATTTT TTTAAGAGCC GTTCGCTGCC GTAG
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Protein sequence | MTSLILVALA FGLNLSTREA TPVQERPPLF ISALASTRDT LWHQGQTRIY WVHIPPAYAK TDTSLPLVVA LHGGGGSGQQ FEAQSKLSEK ADKEGFIVVY PDGLQNPGVL KLRTWNAGNC CGQIASVKQT DDVGFIRKLI DKLTTTYRID PKRVYATGHS NGAMLCYRLA CEFPDKLAAI AANAGTMQLK TTCQPSRVLS ILHIHSRQDN NVPYTGGIGS RSLNKQWNAP VDSTLAVFAK LAGCTPEKPT TKTAGLYTSY TWTGCRDDVA IQYYLTTDGG HAWPGGQKGA RFIGDAPSEA FSNNDVIWDF FKSRSLP
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