Gene Slin_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1493 
Symbol 
ID8725227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1807687 
End bp1808640 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content54% 
IMG OID 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003386342 
Protein GI284036412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.030471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTT TAATTCTCGT CGCGCTAGCT TTTGGATTGA ATTTATCAAC CCGCGAGGCC 
ACTCCCGTAC AAGAGCGACC TCCGTTGTTT ATTTCAGCCC TGGCCAGCAC CCGCGACACG
CTTTGGCATC AGGGACAAAC CCGAATTTAC TGGGTTCATA TACCACCAGC CTACGCCAAA
ACCGACACTT CCCTGCCGCT CGTGGTAGCC CTGCACGGTG GTGGCGGTAG CGGTCAGCAG
TTTGAAGCCC AGTCGAAACT GAGCGAAAAA GCGGATAAGG AAGGATTTAT TGTGGTGTAT
CCCGATGGTC TACAAAATCC GGGTGTTTTG AAGTTACGCA CCTGGAATGC GGGTAACTGC
TGCGGCCAGA TTGCCTCGGT AAAACAGACC GACGATGTGG GCTTTATCCG AAAACTCATT
GATAAACTAA CGACAACCTA CCGGATCGAC CCGAAACGGG TGTATGCTAC CGGGCATTCC
AATGGGGCCA TGCTCTGCTA CCGGCTGGCC TGCGAATTCC CCGACAAACT GGCAGCGATT
GCAGCCAATG CCGGAACCAT GCAACTAAAA ACCACCTGCC AACCCTCCCG TGTTTTGTCA
ATTTTGCACA TTCATTCCCG GCAGGATAAT AATGTGCCGT ATACCGGCGG CATCGGCTCC
AGAAGCCTCA ACAAACAGTG GAACGCTCCG GTCGACAGCA CGCTGGCCGT GTTTGCCAAA
CTAGCGGGAT GTACTCCCGA AAAGCCAACA ACAAAAACAG CCGGTTTGTA TACATCGTAC
ACCTGGACGG GTTGCCGGGA CGACGTTGCT ATTCAGTACT ACCTAACCAC CGATGGCGGC
CACGCCTGGC CCGGTGGCCA AAAAGGAGCC CGCTTCATTG GCGATGCTCC CTCCGAAGCC
TTTTCGAACA ACGATGTAAT CTGGGATTTT TTTAAGAGCC GTTCGCTGCC GTAG
 
Protein sequence
MTSLILVALA FGLNLSTREA TPVQERPPLF ISALASTRDT LWHQGQTRIY WVHIPPAYAK 
TDTSLPLVVA LHGGGGSGQQ FEAQSKLSEK ADKEGFIVVY PDGLQNPGVL KLRTWNAGNC
CGQIASVKQT DDVGFIRKLI DKLTTTYRID PKRVYATGHS NGAMLCYRLA CEFPDKLAAI
AANAGTMQLK TTCQPSRVLS ILHIHSRQDN NVPYTGGIGS RSLNKQWNAP VDSTLAVFAK
LAGCTPEKPT TKTAGLYTSY TWTGCRDDVA IQYYLTTDGG HAWPGGQKGA RFIGDAPSEA
FSNNDVIWDF FKSRSLP