| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1492 |
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| Symbol | |
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| ID | 8725226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1806034 |
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| End bp | 1807572 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein of unknown function UPF0027 |
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| Protein accession | YP_003386341 |
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| Protein GI | 284036411 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00457459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAA CGATTTCACT AGACGATATT TTAACATTAG GCCCCATTCC GGAGCCGCTA
CAAGCAGGTT TCCTGCGGGT GGCCAATGGC CTGATGCTGC GGGGTAATTA CCCCAAAGAG
AAAGTGATGA CGCTCCTGGC GCAGATGCTC CAGAATCCGA AAAAATACGC TTTCTCGAAA
AACAAGGTCA CGAATCTGGC GCAGGCGATT TATGACCTCA ATAAGCAGGG TATTGCCGTT
CCGCTGAGCG AAGCGGGTGC CGACTACTTA CCCGCCGAAC CCGCGCCTTA CGCTTTGCCG
ACTTCGGAGA AACAGGCCGA ACAAACGATT GGTCTGCGTG AAGGGCCCTT ACCGTATGCC
GTTTTTGGTC GGGACTTTAT TGAAGAAGGC GCGTTGAAAC AGATGGAAAC AGCCTCAAGC
CTACCCATTT CGGTGGCGGG GGCACTCATG CCTGATGCGC ACCAGGGGTA TGGGCTGCCT
ATTGGGGGGG TGCTGGCTAC GGAAGCTACC AAAGTTATTC CATTCGCCGT GGGTGTCGAT
ATTGCCTGCC GAATGTGTTT GTCGGTGTTC GACCTGCCGC CGTCCTTCTT AACGCGCGAA
CCGCACCTGC TGAAGCGAGT ATTGGTCGAA CAAACGAAGT TCGGGATGGG GGGTGAAACC
CGTGAGAAGT TCGACGAGAG CGTGATGGAC CTACCGGAAT GGCAGGCCAC TAAAGTGATC
CGCGATCTGA AAGATAAAGC GTATCGTCAA TTGGGCACTT CGGGGACTGG GAATCACTTT
GTGGAATGGG GTATTGTGGA AGTACACGAA GATAGTGTGA CAAAAGAATC GGGGCTGAAT
CTGCCGCCGG GCGAATACCT CGCGCTGTTG TCACACTCCG GTTCGCGCGG GTTTGGGGCC
AATATTGCCA ACACCTATTC CAAACTGGCG ATGCAGAAAA CCAGACTGCC CCGAGAAGCC
GCTCACCTGG CCTGGCTCGA CCTGAATACG CAGGAAGGGC AGGAGTACTG GATCGGGATG
AATCTGGCGG GCGAGTATGC CTCGGCTAAC CACCACGAGA TTCACCATAA ACTGGCCAAA
GCGTTACGCG AGAAGCCGCT GGTCATGGTC GAAAATCACC ACAACTTTGC CTGGAAAGAG
CAACTGGCCG ATGGCCGGGA GGTGCTTGTT CACCGCAAGG GAGCAACCCC GGCAGGAACG
GGTGTGCTAG GTATCATTCC GGGGTCGATG ACGCAGCCAG GCTTTGTTGT GCGTGGTCGT
GGCAATATAG CGTCGATAAA TTCGGCTTCT CACGGAGCCG GACGGCTGAT GTCACGAACG
AAGGCATTTA ATAGCATTAC GCGCTCGCAG TGGAATAAAG CGCTGGTCGA AGCCGGGGTG
CAACTCGTGG GGGGCGACCT GGACGAAGCC CCGATGGTCT ATAAAAACAT CGACACCGTC
ATTGAAGCCC AGCATGATCT GGTAGACGTT CTGGCGAAGT TCACCCCTAA AATCGTTCGA
ATGGCCGACG CGAATCGGAA AGAAGGGCGG GAAGATTAA
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| Protein sequence | METTISLDDI LTLGPIPEPL QAGFLRVANG LMLRGNYPKE KVMTLLAQML QNPKKYAFSK
NKVTNLAQAI YDLNKQGIAV PLSEAGADYL PAEPAPYALP TSEKQAEQTI GLREGPLPYA
VFGRDFIEEG ALKQMETASS LPISVAGALM PDAHQGYGLP IGGVLATEAT KVIPFAVGVD
IACRMCLSVF DLPPSFLTRE PHLLKRVLVE QTKFGMGGET REKFDESVMD LPEWQATKVI
RDLKDKAYRQ LGTSGTGNHF VEWGIVEVHE DSVTKESGLN LPPGEYLALL SHSGSRGFGA
NIANTYSKLA MQKTRLPREA AHLAWLDLNT QEGQEYWIGM NLAGEYASAN HHEIHHKLAK
ALREKPLVMV ENHHNFAWKE QLADGREVLV HRKGATPAGT GVLGIIPGSM TQPGFVVRGR
GNIASINSAS HGAGRLMSRT KAFNSITRSQ WNKALVEAGV QLVGGDLDEA PMVYKNIDTV
IEAQHDLVDV LAKFTPKIVR MADANRKEGR ED
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