Gene Slin_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1488 
Symbol 
ID8725222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1801612 
End bp1802316 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID 
ProductDSBA oxidoreductase 
Protein accessionYP_003386337 
Protein GI284036407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0767657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTAG AAATCTGGAG TGATATCATG TGCCCCTTTT GCTACATTGG CAAACGGAAA 
TTCGAACAGG CTCTCAATCA GTTTGAGCAC AAAGAGCAAA TCAATATTGT CTGGAAAAGC
TTTCAGCTGA ATCCAGATAT GAAAACCCAG CCTGGCAAGA GCATCAATCA GTATCTGGCC
GAAGTAAAAG GCTGGAGCCT GGCCGAAGCC CAACGCATGA ACGACCATGT CACTGGCATG
GCGCGGGAAG TAGGACTATC CTACGACCTG AATAAAGCTG TAGTTGCCAA CTCATGGGAT
GCCCATCGGC TCATTCAACT GGCTAAACAA CACGGTCTGG GCGATGCTAT TGAAGAACGG
TTGTTCCGGG CTTATTTCAC CGAAGGACGC GACACCTCCG ACCATGCTAC CCTGCTGGAG
CTGGGCACCG AAATTGGTCT GGAGGCAACG GCCGTTGAGC AATTACTGAA CAGCAACCAG
TTTGCAGATG CCGTAAACCG GGATGTATAT GAAGCGCAGC AGGTAGGAGC GCGGGGCGTA
CCGTTCTTCG TGCTGAATCG CCGGTACGCC GTTTCGGGTG CGCAACAACC CGAAACATTC
CTGGGCGCTC TCAACACCGC CTGGACAGAA TGGGAGAACG CTAATTCTGT GCTTACCGAC
GTGCAGGCAG ACGGCCCTGC CTGTACACCC GGTGAGGTGT GCTAG
 
Protein sequence
MDVEIWSDIM CPFCYIGKRK FEQALNQFEH KEQINIVWKS FQLNPDMKTQ PGKSINQYLA 
EVKGWSLAEA QRMNDHVTGM AREVGLSYDL NKAVVANSWD AHRLIQLAKQ HGLGDAIEER
LFRAYFTEGR DTSDHATLLE LGTEIGLEAT AVEQLLNSNQ FADAVNRDVY EAQQVGARGV
PFFVLNRRYA VSGAQQPETF LGALNTAWTE WENANSVLTD VQADGPACTP GEVC