Gene Slin_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1479 
Symbol 
ID8725213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1791575 
End bp1792489 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content55% 
IMG OID 
Productdihydrodipicolinate synthetase 
Protein accessionYP_003386328 
Protein GI284036398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTT CTGTAAAATG GGAAGGTGTT TATCCCGCCC TGCTCACTCC GTTTACCGCC 
GACGACCAGC TTGATCTGCC GCTTTTCGAA AAAAACCTGC ACGCCCAGCT CGACGCGGGT
ATTCACGGCT TCATCATTGG TGGCTCGCTG GGCGAAGCCA GTACATTGCT CAACGATGAA
AAAATTGCCC TGCTGGAATC GGCCCTTGGG GTTAGCGACG GCCGGGTTCC CGTGCTGGTG
AACATCGCCG AACAGGGCAC CAAACAGGCC ATTGCCCGCG CCCACGAAGC AGAGAGCAAC
GGCGCCGATG GATTGATGCT GCTCCCCCCC ATGCGCTACC CCGCCGATTC ACGCGAAACG
GTCACTTTCT TTAGCTCCAT CGCACAGGAA ACGTCGCTGC CGATCATGAT CTACAACAAT
CCCTACGATT ATAAGATCAT GACAACCGTG GCTATGTTCG AAGAACTGGC CAAACTACCC
AACATTCAGG CGGTTAAAGA ATCGACCCGT GATCTGACCA ACATTACCCG CATGCGGAAC
GCCTTTGGGG ATCGTTTCAA GCTGATGGGT GGCGTTGATA CGCTGGCCCT GGAAGCTCTG
CTAATGGGCT GCGACGGCTG GGTTGGCGGA CTGGTCGATG CTTTCCCGCA GGAAACAATG
GCTATATACG AACTGGCCAA AGCCGGTCAG GTTGCCGAAG CACTGGCTAT TTACCGCTGG
TTCATGCCGC TGCTGGAACT GGATATTCAT CCAAAACTTG TTCAATACAT CAAACTGGCA
GCCACGGCAA CAGGTATCGG TTCGGAATAT GTACGGGCTC CCCGGCTCAC ACTCGTTGGT
GCCGAACGCG AGCAGGTGTT ACAGGTTATT CAAACGTCGC TGGCCAATCG GCCCGTGTTA
ACGACGGTTC ACTAA
 
Protein sequence
MNVSVKWEGV YPALLTPFTA DDQLDLPLFE KNLHAQLDAG IHGFIIGGSL GEASTLLNDE 
KIALLESALG VSDGRVPVLV NIAEQGTKQA IARAHEAESN GADGLMLLPP MRYPADSRET
VTFFSSIAQE TSLPIMIYNN PYDYKIMTTV AMFEELAKLP NIQAVKESTR DLTNITRMRN
AFGDRFKLMG GVDTLALEAL LMGCDGWVGG LVDAFPQETM AIYELAKAGQ VAEALAIYRW
FMPLLELDIH PKLVQYIKLA ATATGIGSEY VRAPRLTLVG AEREQVLQVI QTSLANRPVL
TTVH