Gene Slin_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1462 
Symbol 
ID8725196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1772903 
End bp1773340 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_003386311 
Protein GI284036381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0493403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.625814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAC GCCAAATACT TCAGGGAAAG CGCATTAACG CGCTTTATAG TGTCTCCTCA 
GACCAAACGG TGCTGGATGG ACTAAAGGTC ATGGCCGAAA AAAATATCGG CGCTTTACTC
GTTGTTGATA ACGGGGAACT GACAGGCATA TTTTCAGAAC GGGATTACGC CCGTAAGGTA
ATTTTGAAAG ACAGACATTC TGACGATACA CGCATCGCCG ATGTTATGAC CGCCAATGTG
ATCACCATCG GGCCGGACCA GTCACTGGAA GAGGGTATGG TGATCATGTC AGACCGGCAT
ATTCGCCACC TGCCTGTTGT CGACAAAGGC GAATTAATCG GCATTATATC AATTAACGAC
ATCGTTACAG CCATCATTCG CGATCAGAAG ACGCGTATCG ATTCGCTGGA AAGCTACATA
TCGGGAAGCC CATATTGA
 
Protein sequence
MNIRQILQGK RINALYSVSS DQTVLDGLKV MAEKNIGALL VVDNGELTGI FSERDYARKV 
ILKDRHSDDT RIADVMTANV ITIGPDQSLE EGMVIMSDRH IRHLPVVDKG ELIGIISIND
IVTAIIRDQK TRIDSLESYI SGSPY