Gene Slin_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1459 
Symbol 
ID8725193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1768630 
End bp1770462 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content50% 
IMG OID 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003386308 
Protein GI284036378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.115769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.894104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG TACAAACCGA GAAGGGGCAA ATCTCAATCC ATACCGAGAA TATTTTCCCA 
ATTATCAAAA AATTCCTCTA TTCTGACCAC GAGATTTTTC TGCGCGAATT AGTGTCAAAT
GCCGTGGATG CTACGCAGAA ACTGAACCAG TTGGCTTCGT TTGGCGAATT CGGAGGTGAA
CTGGGCGAGT TGAAAGTGAC GGTTTCGCTG GATGAGGAAG CCAAAACGAT CACCATCAGT
GACAACGGCA TCGGTATGAC TGCCGATGAA ATCAAGAAAT ATATCAACCA GATTGCTTTT
TCGGGTGCCA CCGATTTTCT GGAAAAATAC AAAGACAAAA CGGACGACAA AGGACAGATT
ATCGGTCACT TTGGCCTGGG CTTCTACTCG GCCTTTATGG TTGCCGAGAA AGTAGACATC
GTTACCAAAT CGTACCGGGA TGGCGCTGAG GCCGTTCGCT GGACCTGTGA TGGCTCTACA
GAGTTTGAAC TGACGCCCAC CGAGCGTGCC GACCGAGGTA CGGACATAAT TCTGCACATT
GCACCCGACT CCGAAGAGTT TTTGAGCAAG AGCCGGTTGC AGGGAATTCT CGACAAGTAT
GCCCGGTTCC TGCCCGTTGC CGTGGAGTTC GACGAGAAAG TCGTTAACAA CACGAACCCG
ATCTGGACCA AATCACCGGC CGATCTGACC GACGAGGATT ACAAGAATTT CTATCGGGAA
CTGTACCCAA TGGGGGAGGA GCCGCTGTTC TGGATTCACC TGAACGTGGA TTACCCATTC
AACCTGACGG GTATTTTGTA TTTCCCGCGT ATCAAAAACG AGCTGCGGTT CCAGCGCGAG
AAAATTCAAC TCTACAGCCG TCAGGTATTT ATTACCGATG AGGTGAAGGA CGTAGTGCCC
GATTTCCTGA TGATGCTGCA TGGCGTTATT GACTCGCCCG ATATTCCGCT CAATGTATCG
AGGAGTTTCC TGCAAGCCGA TAGCAATGTT AAAAAGATCA ATGGCTATAT CACCCGGAAA
GTCGCCGATA AGCTGAACGA GCTGTTCAAC GCAGACCGCA AAGGCTTTGA AGAGAAGTTC
GACGATATCG GCCTGTTCAT CAAATACGGT ATCCTGAGCG ACGATAAGTT CTGGGAGAAA
GCCAAAAATT TTGTGTTGCT GAAGAATACC GAAGGCGTAT TTACAACCCT GGATGAGTAC
CGTGAGAAAG TACAGGCTAA CCAGACCGAT AAGAGTGAGA CCCTGATCAT GCTGTACACC
TCCGACCGTA AGCAACAGGA TGCTTACATT GAGTCGGCTC GGCGACGGGG CTACGATGTA
TTGCTGATGG ACAACGTTAT TGACGCTCAC TTCATCAATG CCCTGGAGCA GAAGCTTGAG
AAAGTGCGCT TCCAGCGTGT TGACGCCGAT ACACTCGATA AATTAATCGA CAAAGGGCTG
AATAACGAAA GCGTTCTGTC GGAGGCCGAC CAAACTAAAC TGAAAGAGGT ATTTGAGCAG
GTGCTGGACA ACAAGATGCT GCATGTGAGT GTAGAAGCTC AGCCAACGGA TGAACTGCCC
GTTACGATTA CCATGCCTGA GTTCATGCGC CGGATGAAAG ATATGTCGGC TCTTTCGGGT
GAGCAGTCGT TCTACGGGAA TCTGCCCGTT ACGTACAACG TCGTTGTCAA CGCGAACCAC
CCGCTGATTG GCAAGGTACT GGCAGAATCG GATGCCGATG CACAAAAAGC AGTGGTGAAG
CAGGTGTATG ATCTGGCGTT GCTTTCGCAG AACATGCTCA CCGGTGCCGA CTTAACCGCC
TTTGTGAAAC GGACGGTAGC CGGATTGGTA TAA
 
Protein sequence
MEAVQTEKGQ ISIHTENIFP IIKKFLYSDH EIFLRELVSN AVDATQKLNQ LASFGEFGGE 
LGELKVTVSL DEEAKTITIS DNGIGMTADE IKKYINQIAF SGATDFLEKY KDKTDDKGQI
IGHFGLGFYS AFMVAEKVDI VTKSYRDGAE AVRWTCDGST EFELTPTERA DRGTDIILHI
APDSEEFLSK SRLQGILDKY ARFLPVAVEF DEKVVNNTNP IWTKSPADLT DEDYKNFYRE
LYPMGEEPLF WIHLNVDYPF NLTGILYFPR IKNELRFQRE KIQLYSRQVF ITDEVKDVVP
DFLMMLHGVI DSPDIPLNVS RSFLQADSNV KKINGYITRK VADKLNELFN ADRKGFEEKF
DDIGLFIKYG ILSDDKFWEK AKNFVLLKNT EGVFTTLDEY REKVQANQTD KSETLIMLYT
SDRKQQDAYI ESARRRGYDV LLMDNVIDAH FINALEQKLE KVRFQRVDAD TLDKLIDKGL
NNESVLSEAD QTKLKEVFEQ VLDNKMLHVS VEAQPTDELP VTITMPEFMR RMKDMSALSG
EQSFYGNLPV TYNVVVNANH PLIGKVLAES DADAQKAVVK QVYDLALLSQ NMLTGADLTA
FVKRTVAGLV