| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1423 |
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| Symbol | |
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| ID | 8725157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1731366 |
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| End bp | 1733042 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003386272 |
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| Protein GI | 284036342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.423704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGA ACCTGACTAC GGCTATTTTT ACGGCATTGT GCTGTGTATT GAGCCATTCG
CTGACAGCGC AAACAACGCT CGTCAACCCA ATCCTGACCG GTTTTTACCC CGACCCGAGC
ATTGTGCGGG TGGGGCCTGA TTATTATTCT GTGCATTCTA CTTTTTCCTA TTTCCCGGGG
TTGCCGATCA TGCACAGCCG TGACCTGAAA AACTGGAAGC AAATTGGCAA TGTGATCAAC
CGTCCTTCGC AAATGGAGTT CATGGGCGAG CGGATGACGC GCGGGTTGTT TGCTCCGGCC
ATCAGTTATT ACAAAGGGAC GTATTACGTA ACCTGTACGG ATATTGACCA TGATGGAAAT
TTTGTCGTAA CGTCAAAGAA TCCGGCGGGG CCTTTCAGCA ATCCGGTAAA AATTCCGCAG
GTAAAAGGAA TTGACCCATC CATTTATTTT GATGAATCCA CCGACAAAGC CTATATCATT
TACAACAGCG ACGCGCCCGA CCGCAAACCG CTGTATTCGG GCCACCGCAC CATCCGGATG
TATGAGTTCG ATTATAAGAA CTTGACCGTA CTGGGCGAAG AAAAGCAGTT GGTGAACGGA
GGTGTAGACC TCTCGAAAAA ACCGGTCTGG ATTGAAGGAC CCCATATTCT AAAGCATAAC
GGCTGGTACA TCCTGTATGC GGCCGAAGGC GGAACCTCCG TCAATCACTC GCAGGTGGCA
CTGCGCAGCA AAGATATTTG GGGACCTTAT GTCCCGTTTG AAGGTAATCC GGTGCTGACG
CAACGAGGCT TACCGGCCGA CCGGCCCAAC CCGATCACGT CGGCGGGGCA CGCTCAATTT
ATCGAAGGTC CCGACGGCAA TTGGTATTCG ATTTTCCTGG CGGTACGTCC CTACGAAGGC
GATTACTATA ATACAGGCCG CGAAATGTTC ATTGCTCCGC TGACGTGGGT AAACGATTGG
CCAATGATCG AACATGGCGA AAAAGCCATT GAATACCAAT ACAAAACCAA CATCAAAGAA
GTAAAGCAGA AAGGCGTTTT ACCGCAAAAC GGCAACTTCG CGTATACGAT GACGTTCGAC
AAAGGGCTTG ATCTATCGAT GCTTTTTTTA CGAACGGTGG ATAGCAGTTC GTTTAAAACG
TCAAAGGCTA ATGGACTTAC GCTTACACTC AAACCGGAAA CAATTTCTGA AATGGGGAAT
CCGTCGTTTG TGGGCAAGCG GCAGCAACAC TTATACAGCA CAGCCGAAAC TGAACTGAGC
TTTTCACCCA AGTCAGATAA CGAGAAAGCA GGTTTGGTGA TTTTTCAGGA CGAACGTCAT
TTTTACTTCG CGGCTAAATC CAAAAACGCA GGTAAAGACG TTATTCAGTT GTTCAAGAGT
AAAGACAAAG CCCTGGAATT GGTAACTGAA GTGCCTTTAG CGTCATCTGC TGCCAGGGTG
GATTTTAAAA TACAGTCAGA AGGTGCCTTG TACAGCTTCT ACTACTCGAC CGATGGAAAG
AACTGGAACT TGTTAAAAGA CCAGGTTGAC GGCAAGTTCC TGAGCACTAA AGTGGCCAAC
AGCTTCATTG GCTGCGTGTA TGGCCTGTAT GCTACATCAT CGGGCGAGAA ATCCGAGAAT
TCGGCTTCGT TCAAGTACCT GAAATACAAA GGCGACGACC CGATGTATAA GAAGTAA
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| Protein sequence | MFKNLTTAIF TALCCVLSHS LTAQTTLVNP ILTGFYPDPS IVRVGPDYYS VHSTFSYFPG
LPIMHSRDLK NWKQIGNVIN RPSQMEFMGE RMTRGLFAPA ISYYKGTYYV TCTDIDHDGN
FVVTSKNPAG PFSNPVKIPQ VKGIDPSIYF DESTDKAYII YNSDAPDRKP LYSGHRTIRM
YEFDYKNLTV LGEEKQLVNG GVDLSKKPVW IEGPHILKHN GWYILYAAEG GTSVNHSQVA
LRSKDIWGPY VPFEGNPVLT QRGLPADRPN PITSAGHAQF IEGPDGNWYS IFLAVRPYEG
DYYNTGREMF IAPLTWVNDW PMIEHGEKAI EYQYKTNIKE VKQKGVLPQN GNFAYTMTFD
KGLDLSMLFL RTVDSSSFKT SKANGLTLTL KPETISEMGN PSFVGKRQQH LYSTAETELS
FSPKSDNEKA GLVIFQDERH FYFAAKSKNA GKDVIQLFKS KDKALELVTE VPLASSAARV
DFKIQSEGAL YSFYYSTDGK NWNLLKDQVD GKFLSTKVAN SFIGCVYGLY ATSSGEKSEN
SASFKYLKYK GDDPMYKK
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