Gene Slin_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1415 
Symbol 
ID8725149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1718874 
End bp1720970 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content53% 
IMG OID 
Productcoagulation factor 5/8 type domain protein 
Protein accessionYP_003386264 
Protein GI284036334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ACCCTAAATC CATATTCGTT CAACTGGCGC TCTGTTTGTT GACAGGTCTT 
TCCGGACTTG CCCAGACATC TCCGCCACAG CCCGTTGGGC CACTTCCGAG TGCCAACCAG
TTGCGCTGGC AGAAAATGGA GTATTACGCT TTCATCCATT TTTCGATCAA TACCTATACC
GATATGGCCT GGGGCCTCGG CAACGAAGAC CCGAAACTGT TCAACCCCAC AAAACTGGAT
TGTCGGCAAT GGGCGCGGAT TTGTAAAGAG GCCGGGATGA CAGGCATCAT TTTCACCGCC
AAACACCATA GCGGTTTCTG CCTTTGGCCA TCCAAATACA CCGATTACTC CGTCAAAAAC
GTGCCTTGGC GCAATGGGAA AGGCGATATC GTGCGCGAAC TGGCCGACGC CTGCAAGGAA
TATGGCCTGA AGTTCGGGGT ATACCTCTCA CCCTGGGACC GGAACCATGC CGACTACGGT
AAGCCCGAAT ACATCACCTA TTTCCGTAAC CAATTGACGG AGTTGCTGAC CAACTACGGC
GACATTTTTG AAGTCTGGTA CGACGGGGCC AACGGCGGGT CGGGCTATTA TGGCGGAGCC
AACGAAACGC GTAAAATCGA CGCCAAAACG TATTACGACT GGCCGAATAC CTACAAACTC
GTGCGGAAGC TTCAGCCCAA CATCGTCATC TGGAACGACG GGGGCGACCG CGCCGACCTG
CGCTGGGTGG GTACCGAAGC CGGCTACGTC GGCGAAACCA ACTGGAGCTT ACTGAATGCC
ACCGGCGCCG TACCCGAAGA AATGTTGCGG CATGGCGTCG AGAACGGCAA TGCGTGGGTG
CCTGGCGAAG TAAACACGTC CATCCGGCCC GAGTGGTTCT ACCACGAACG CGAAGACAAA
AAGGTGAAAA CGTTGCCTCA ACTGATGGAT ACCTATTACA ATTCCATCGG TCGGAACGGG
ACACTGCTGC TCAATTTTCC GATCATGCCC AACGGCCTGA TTAATGACTT AGATGAGAAA
GCCGTGCAGG CTTTCGCCAA AGCCAGGAAA GAAGCCTTTG CCGTAAATCT AGCTAAAAAT
GCGAAAGCAA CGGCCTCTGA GGTACGAGGG AAAAGCGCGA CGTACAATGC TGATAAAGCC
ATTGACGCCG ACTTGGAAAG CTACTGGGCC ACAGATGATG CTGTTCGGAA AGCCTCACTG
ACGTTACAGT TCGCGAAGCC TACGACGTTC AACCGGTTTC TGGTGCAGGA ACCCATTCGC
CTGGGGCAAC GGGTTAAATC GTTTACCGTC GAGGCTCTGG TCGATGGCAA TTGGAAGGCG
ATTGACAAAC AAACGACCAT TGGCTACAAA CGCATTCTGC GTTTCCCCAC CGTCGAAGCC
ACCCAACTGC GCCTGACGAT TCTGGACGCC AAAGGCAGTC CGTTGATCTC GAATCTGGCT
GTTTACAATG CCCCTCTGAT TCTATCGCCC CCGGTCATCA CCCGCAATCA GGCGGGCGAC
ATTCAGATCA AGGCGGGCGA TACCGAATCG GACGTGTATT ACACCCTCGA CGGTAGTATG
CCGACAGCGA AATCCAGCAA ATACACAGCT CCGGTAAAAA CCAACTCCGG CAAAGTGGAC
ATCAAAGCCA TCGCTTACAA CCCCTTTACA AAGCAAAGCA GCGTCGTCAA TGAAGAGAAA
TTTGAGATTG CCCGCAGCAA CTGGAAAATC CTGAGTACCG GCGCCAAATC GGCCTATCAG
GCACTTGACG GCAACCCCGG CACGTCCTGG CAGCAACCCA AAAGTCAACC CTTGCCTGCT
GATCTGGTCA TTGATCTGGG GAAGGAAGAA AACCTGACCG GTTTCCGGTA CCTGCCTGCC
CAAAACTGGT GGGAAGAGGC CAGCATCATC ACCCATTACG AGTTTGACGT ATCAGCTGAC
AATAAAAACT GGAAACGAGT TAGCGAAGGC GAATTCTCGA ATATCAAAAA TAGCCCAGTC
TGGCAAACCA AATCGTTTGC GCCGATCAAA GCCCGGTATG TGAAATTGAC GGCGTTAAAG
AATACGCAGG AGGGGTCGGC CTCGGGCTAC GCGGAAGTGG ATGTGATGAC ACAGTGA
 
Protein sequence
MKLNPKSIFV QLALCLLTGL SGLAQTSPPQ PVGPLPSANQ LRWQKMEYYA FIHFSINTYT 
DMAWGLGNED PKLFNPTKLD CRQWARICKE AGMTGIIFTA KHHSGFCLWP SKYTDYSVKN
VPWRNGKGDI VRELADACKE YGLKFGVYLS PWDRNHADYG KPEYITYFRN QLTELLTNYG
DIFEVWYDGA NGGSGYYGGA NETRKIDAKT YYDWPNTYKL VRKLQPNIVI WNDGGDRADL
RWVGTEAGYV GETNWSLLNA TGAVPEEMLR HGVENGNAWV PGEVNTSIRP EWFYHEREDK
KVKTLPQLMD TYYNSIGRNG TLLLNFPIMP NGLINDLDEK AVQAFAKARK EAFAVNLAKN
AKATASEVRG KSATYNADKA IDADLESYWA TDDAVRKASL TLQFAKPTTF NRFLVQEPIR
LGQRVKSFTV EALVDGNWKA IDKQTTIGYK RILRFPTVEA TQLRLTILDA KGSPLISNLA
VYNAPLILSP PVITRNQAGD IQIKAGDTES DVYYTLDGSM PTAKSSKYTA PVKTNSGKVD
IKAIAYNPFT KQSSVVNEEK FEIARSNWKI LSTGAKSAYQ ALDGNPGTSW QQPKSQPLPA
DLVIDLGKEE NLTGFRYLPA QNWWEEASII THYEFDVSAD NKNWKRVSEG EFSNIKNSPV
WQTKSFAPIK ARYVKLTALK NTQEGSASGY AEVDVMTQ