Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1403 |
Symbol | |
ID | 8725137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1704034 |
End bp | 1705926 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Radical SAM domain protein |
Protein accession | YP_003386252 |
Protein GI | 284036322 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.59751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAAA GACCCCTTAC AGACTGGCTG CCTCTGACAA TGAAAGAAGT CGAGAAAAGA GGCTGGGATG AAGTTGATAT TGTCCTCGTA TCCGGAGATG CCTATGTCGA CCATCCTGCT TTTGGCACGG CTGTGATTGG CCGCATAATG GAAAGCGAAG GATTCCGCGT GGCCATTATT GCTCAACCAA ACTGGAAAGA CGATCTGCGC GACTTCAAGA AGTTTGGCAA GCCCAAATAC TTCTTTGGCG TTACGGCCGG GTGCATGGAC TCCATGGTCA ACCATTACAC GGCCAACAAA CGCCTGCGTT CCAATGATTC GTATACGCCC GGTGGCGAAG CGGGTTTTCG GCCCGACTAC GCTACCATCG TATATACCAA AATCCTGAAA GAACTGTACC CCGATGTGCC CGTATTGCTC GGTGGCATTG AAGCCTCCCT GCGTCGGGTT ACGCACTATG ACTATTGGCA GGATCGGCTG ATGCCCTCTA TCCTGGTCGA TGCCGGAGCC GATATGCTGG TCTATGGTAT GGGCGAACAA CCCCTCCGCG AAATTCTGAA ACTTTCCCGG CAGGGTGTCC CCTTTTCGTC GATGCGGAAC ATCAATCAGG TGGCTTTCAT GCACGACGCT AACACCGAAC TGCGGGACTA CAACGACTGG AGTTCGGTCG AACTGGCCAG CCATGAGGTT TGTCTGGAAG ATAAAATCAA ATACGCAGCC AACTTCAAGA TTGTTGAAGT CGAGTCGAAC AAATGGCAGG CGAACCGGAT TCTGCAACGG GTGGGCGATC AGATACTGGT CATCAACCCA CCGTTCAAAA CGATGGAAGA GGCCGAAATC GATAAATCCT TCGATTTGCC CTACACCCGT CTCCCCCACC CGAAATACAA AAAGCGTGGC CCGATTCCGG CTTACGATAT GATCAAGTTC TCGGTCAATA TGCACCGGGG CTGTTTCGGG GGGTGCAGTT TCTGTACTAT TTCGGCTCAC CAGGGCAAGT TTGTGGCCTC ACGAAGCGAA GCATCGGTCT TAAAAGAGGT GGACGAAATC ACGAAACACC CCGAATTCAA AGGCTACATT TCCGACCTGG GAGGCCCATC GGCCAACATG TACAAGATGA AGGGCAAAGA TGAGTCGATC TGCGCCCGTT GCCAGAGCCC GAGCTGTATT CACCCGGTTA TCTGTTCGAA CCTCGATACC TCACATAAGC CTATGACGGA GCTGTATCGT AAGGTCGATG CCAACCCCAA GGTCAAGAAG GCATTTGTTG GTTCGGGAGT GCGGTATGAT TTGCTGGTCG ACGACTTCAA CAAAAACAAC AGCGACGGCA ACCACGACGA ATACATGGAG CAGTTGGTCA CGCGCCACGT GTCGGGCCGA TTAAAAGTTG CCCCCGAACA CACGGCCGAT GATACACTTC GCGTGATGCG GAAGCCATCA TTCCGGTATT TCAAGCTGTT CAAACAGAAA TACGACAAGA TTCAGGAGAA GTACAATCTT AAGCAACCCC TGATTCCGTA CTTTATTTCG TCGCACCCCG GCTGCGAAGA GCAGGACATG GCGAACCTGG CCGCCGAAAC GAAAGACATG GGCTTTCAAC TCGAACAGGT TCAGGACTTT ACGCCAACGC CCATGACCGT GGCCGAGGTA ATCTACTATT CGGGCGTTCA CCCCTACACG CTGAAACCGG TTAAAACGGC CAAGACGCGG GAAGAAAAAA AGGCCCAGAA CAACTACTTT TTCTGGTACA AACCCGAGTA CAAAAACTGG ATACGCAATC GGCTAAACCA GCTTAAGCGG CCGGATCTGG CAGAGCGTTT ACTGGGTAGC CCGAAGAAAG AAAGCCCTGG AAAAACTAAG TTTACCGGCA ATTATAAAGG GAAAAAGCGA TAA
|
Protein sequence | MIERPLTDWL PLTMKEVEKR GWDEVDIVLV SGDAYVDHPA FGTAVIGRIM ESEGFRVAII AQPNWKDDLR DFKKFGKPKY FFGVTAGCMD SMVNHYTANK RLRSNDSYTP GGEAGFRPDY ATIVYTKILK ELYPDVPVLL GGIEASLRRV THYDYWQDRL MPSILVDAGA DMLVYGMGEQ PLREILKLSR QGVPFSSMRN INQVAFMHDA NTELRDYNDW SSVELASHEV CLEDKIKYAA NFKIVEVESN KWQANRILQR VGDQILVINP PFKTMEEAEI DKSFDLPYTR LPHPKYKKRG PIPAYDMIKF SVNMHRGCFG GCSFCTISAH QGKFVASRSE ASVLKEVDEI TKHPEFKGYI SDLGGPSANM YKMKGKDESI CARCQSPSCI HPVICSNLDT SHKPMTELYR KVDANPKVKK AFVGSGVRYD LLVDDFNKNN SDGNHDEYME QLVTRHVSGR LKVAPEHTAD DTLRVMRKPS FRYFKLFKQK YDKIQEKYNL KQPLIPYFIS SHPGCEEQDM ANLAAETKDM GFQLEQVQDF TPTPMTVAEV IYYSGVHPYT LKPVKTAKTR EEKKAQNNYF FWYKPEYKNW IRNRLNQLKR PDLAERLLGS PKKESPGKTK FTGNYKGKKR
|
| |