Gene Slin_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1394 
Symbol 
ID8725128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1694519 
End bp1695493 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_003386243 
Protein GI284036313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.406188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA TAGGAACAGA CAAGGGAAAG GCAAAAGAAT TTCTAGAATC GGGAAATGTG 
GTGGGTATTC CTACCGAAAC GGTATACGGG TTAGCCGGTA ACGCGCTCGA TACCAACGCC
ATCTTACGAA TTTTTCAGGT AAAGAATCGC CCTTCGTTCG ATCCCCTCAT TGTTCATACG
GATTCAATCG ATAAGGTTAG CCAATTTATC ACCGACATTC CCGAGCCAGC CCGAAAACTG
GCCGAAGCGT TCTGGCCCGG CCCGTTAACC CTGCTTCTCC CCAAACAGAG CCTTATCCCG
GACCTCGTTA CGTCGGGCCT TCCCAGTGTT GCGGTCCGCA TTCCGAACCA TCCGCTCACC
CTCGATCTGC TGCGCTCGCT CGATTTCCCG CTGGCGGCAC CAAGCGCCAA TCCTTTCGGG
TATATCAGCC CCACCACAGC CCAACATGTA GCCGATCAAC TGGGCGATCA GGTGCCGTAT
ATCCTTGATG GCGGACCTGC CGGAGTAGGT ATAGAATCTA CGATTGTCGG ATTCGAGAAT
AATCTACCAA CCGTTTTTCG GCTGGGTGGT ATGGCACTGG AGCAGATTGA GGCCGTTATT
GGGTCGGTTT CGGTACGTAC GCATTCAACG TCGAACCCGC AGGCACCGGG CATGTTGAGC
AGCCATTATG CCCCCCGAAA ACCGCTCATG CTTTTATCGC CGGGAGAGAG TCCCCAACCG
GGCGAACGAA TCGGCGCATT GGCATTCCGG GAGCCTTTTG GCGGTATTCC AATCAGCAAT
CAGCGTGTTC TCTCGCCCAC GGGTGACCTC AACGAAGCAG CCAAAAATCT CTTCGCTTGC
CTTCGGGAAT TAGATACACT TTCGGTTGAT CTCATCTACG CCGAACCTCT GCCGAATACG
GGCTTAGGCT CTGCGATGAA TGACCGACTG CGCCGGGCCA GCGTGCCCGC CCCTACAGCA
AGCCCGTTTC GATAG
 
Protein sequence
MAQIGTDKGK AKEFLESGNV VGIPTETVYG LAGNALDTNA ILRIFQVKNR PSFDPLIVHT 
DSIDKVSQFI TDIPEPARKL AEAFWPGPLT LLLPKQSLIP DLVTSGLPSV AVRIPNHPLT
LDLLRSLDFP LAAPSANPFG YISPTTAQHV ADQLGDQVPY ILDGGPAGVG IESTIVGFEN
NLPTVFRLGG MALEQIEAVI GSVSVRTHST SNPQAPGMLS SHYAPRKPLM LLSPGESPQP
GERIGALAFR EPFGGIPISN QRVLSPTGDL NEAAKNLFAC LRELDTLSVD LIYAEPLPNT
GLGSAMNDRL RRASVPAPTA SPFR