Gene Slin_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1383 
Symbol 
ID8725116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1682417 
End bp1683880 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386232 
Protein GI284036302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.229216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.586845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG AAAAAAAGAG GTACGCAGAG GTAGTAGCTC AACTTATACA CACTAACGTA 
TTTTTTGTTT TTTGTTTATC GTTTTGGCTA AGCCTTTTTG TTGTTTCCTG CCGTCCGTCG
AGTAACCGTC TGAATCCTAA AGCGCCTAAA GAAGTCTATA ACACTACCAA AATGGAAGTC
CAGAACGAAC GGTTTTTGTC GACGGCTCAC GTACCGGTTT CTATTGCACT GAGTGATATT
GAACACCAGA TCAATACACA GGTCAGCGGG TTGATTTACG AAGACAACAG CCTGACGGAT
AACGGCAACG ATCAATTCAT GACGAAAGTC TGGAAGCGGG GCACCATTCT GGTTAGCGCG
CAGGATAGCT TGTTTCATTT CACCGTGCCC CTGCGCATCT GGGTTAAAGC GGGTGTTTCG
GTACTGGGTT TTACGCAGTA TAAAGAGACG GAATTTGAGA TCGACTTGCG GTTTAAAACA
AAATTCGACC TCGACCGCGA CTGGTCCGTC AATACCCATA CTGAAGCGGA TGGGTATGGC
TGGGTAAAGC GGCCAACCAT TGGTTTCGTG GGCCTGAATA TCCCCATTAC TAATTTCGTG
GGGCGGATGA TCGACAAAAA TCTGGGTAGT ATCACCAAAA CACTCGATCA GCAGGTACGG
CGGAATATAG ACCTTCGGAC GCCCGTGCTG AAAGCCTGGA ATCTTCTTCG CGAGCCGTAT
CTGCTTTCCG ACAAATACCG TACGTATTTA CAGGTGGTGC CCAAGCGGGT ACTCATTACG
CCCCTCCGGT TTGAAGGCCA GGTCATTCGC TCAACAATCG GTATAGAGGG CTACGCCCTA
ACCACCACCG GAGCAAAACC CGCCGTCAAA CCAGCCGTAT CGTTACCCGA TTTGACGGTG
GTTCCGCAGG TGAAAGATGA TTTTCAGATC GGTTTGCTGA GTGAGGCCAC GTATCAGGAA
GCGGCTAAAC TAGCCGCTGA TGAGTTTGTC GGGAAGTCGT TTTCGTTCAG CGAGAATCGT
TATTCGATCA CCGTCACGAG CATGGATATG TACGGTCAGA ACGATAACCT CATTATCAAA
GCGGGACTGA AAGGAACCAT CAACGGAGAT ATTTACCTGA GTGGACGGCC TTACTACGAC
CCCCGCGACC AGACTATCTC GCTGAAAGAC CTAAAGTACG ATCTGGATAC GCGAAATATT
TTGCAGCAGT CAGCCAGCTG GCTACTGAAA GGTACGTTTG CCCGTACCCT CGAAAAACAA
CTGACCATTC CGGTAGGGAG CCAACTGGCA GATATGCAGA AACAGATTCA GGAACAGTTG
AAAAATAATC AGGTCATCAA AGGTGTGGTC ATCAATGGTC GGCTCGACGA CATAAAACCA
GATCAGGTTT ATCTGACTCC CACCGCCATG CTGGCCGTAG TAAACGTCCG TGGCCGCGTG
GAGGTAAAGG TTGAGGGGTT ATAG
 
Protein sequence
MHKEKKRYAE VVAQLIHTNV FFVFCLSFWL SLFVVSCRPS SNRLNPKAPK EVYNTTKMEV 
QNERFLSTAH VPVSIALSDI EHQINTQVSG LIYEDNSLTD NGNDQFMTKV WKRGTILVSA
QDSLFHFTVP LRIWVKAGVS VLGFTQYKET EFEIDLRFKT KFDLDRDWSV NTHTEADGYG
WVKRPTIGFV GLNIPITNFV GRMIDKNLGS ITKTLDQQVR RNIDLRTPVL KAWNLLREPY
LLSDKYRTYL QVVPKRVLIT PLRFEGQVIR STIGIEGYAL TTTGAKPAVK PAVSLPDLTV
VPQVKDDFQI GLLSEATYQE AAKLAADEFV GKSFSFSENR YSITVTSMDM YGQNDNLIIK
AGLKGTINGD IYLSGRPYYD PRDQTISLKD LKYDLDTRNI LQQSASWLLK GTFARTLEKQ
LTIPVGSQLA DMQKQIQEQL KNNQVIKGVV INGRLDDIKP DQVYLTPTAM LAVVNVRGRV
EVKVEGL