Gene Slin_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1357 
Symbol 
ID8725090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1652709 
End bp1653962 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content51% 
IMG OID 
Productcompetence/damage-inducible protein CinA 
Protein accessionYP_003386206 
Protein GI284036276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACA CCGTCCGCGC CGAAGTAATC ACCATTGGCG ACGAAATATT ATTTGGACAA 
ATCACCGACA CGAATACCGC CTGGATCGGA ACCGAGTTAA CGAATATTGG GGTCCGCGTA
GTTCGCAAAT CGTCAGTAGG CGACCAGACA GAGGCTATTT TGCAGGTTCT TGCCGAAGCA
CACCAGCGCG CTGACGTCAT CATCATCACG GGTGGCTTAG GGCCTACCAA GGACGACATA
ACCAAGAAGA CGCTCTGTAC CTATTTCGGC GTTGGGATGG TTCGGAACGA AACAGCGCTG
GCTCTGGTAA CTGGCTTCTT CGAAAAACGG GGACGGGAAA TGACCGACCT CAACCGCGGG
CAGGCCGACC TTCCGGCCAA CGCTGTATAT ATTCAGAACG ATTGGGGAAC TGCCCCCGGT
ATGTGGTTTG AGCACCAGGA TCGGGTATAC GTATCCTTGC CCGGTGTTCC GTTTGAGATG
AAGCATCTCA TGTCGAACCG AATTTTGCCA AAGCTGACTG CGCATTTTCA AACTCCCATC
ATCAAGCATA AAATGATTCG GACGGTAGGA ATTGGCGAAT CGTTTCTGGC CGAACGGATC
GAAGCCTGGG AGGATGCGCT TCCTGAACAC ATCAAGCTGG CTTATCTGCC CAGTTTCGGG
GGTGTAAAAT TACGGTTGAC CGCAACGGGC AGCGACAATA CCTTACTCGA TAGCCAGCTG
AATGAACAGG TTGCGAAGGT GATGCCCCTG ATTGAAAAAA ACGTTTATGG CTTCGATAAT
GACGAAATTG AAACCGTTGT CGGCAAACTT TTGATCGAAA AGCAATTAAC CCTGGGCATT
GCCGAGAGTT GTACAGGTGG TTACGTATCT GCACAAATAA CGAAAGTGCC CGGCTCCTCT
GCTTATTTTT GGGGCAGTGT TGTTAGCTAT AGCAACAGCG TAAAGGTAAA TCAGTTGGGC
GTGCTGCCGG AAACACTGGA AGCTTATGGG GCCGTGAGCG AAGAAACAGT CCGTCAAATG
GCCGAAGGCG TTCGTGAGGC CCTTGGCACC TCGGTGGGCA TAGCGACCAG CGGCATTGCC
GGACCTGACG GCGGCTCCCC CGAAAAGCCC GTTGGCACAA TCTGGATTGC CTGTTCAACC
AGCCAGCGTA CAGTTACCAG ACTCCTTAAA CTGGGCCAGT ATCGCGATCA AAACATTCAA
CTTACAACGA TGTATGTACT GAATATGCTG CGGGAAGAAA TATTAAATCA GTAA
 
Protein sequence
MINTVRAEVI TIGDEILFGQ ITDTNTAWIG TELTNIGVRV VRKSSVGDQT EAILQVLAEA 
HQRADVIIIT GGLGPTKDDI TKKTLCTYFG VGMVRNETAL ALVTGFFEKR GREMTDLNRG
QADLPANAVY IQNDWGTAPG MWFEHQDRVY VSLPGVPFEM KHLMSNRILP KLTAHFQTPI
IKHKMIRTVG IGESFLAERI EAWEDALPEH IKLAYLPSFG GVKLRLTATG SDNTLLDSQL
NEQVAKVMPL IEKNVYGFDN DEIETVVGKL LIEKQLTLGI AESCTGGYVS AQITKVPGSS
AYFWGSVVSY SNSVKVNQLG VLPETLEAYG AVSEETVRQM AEGVREALGT SVGIATSGIA
GPDGGSPEKP VGTIWIACST SQRTVTRLLK LGQYRDQNIQ LTTMYVLNML REEILNQ