Gene Slin_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1327 
Symbol 
ID8725060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1624444 
End bp1625115 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID 
Productprotein of unknown function DUF820 
Protein accessionYP_003386176 
Protein GI284036246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.621558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.19062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA CCCGCGTTGC CGAATTATTA GAAGCCCCCG ATGCCAAATT GGTCATTGAG 
CGGGCGCAGG CTATTCTGGC CGATGAAGCC CAACGTCGCC GGGCGTTTCG AGAATGGCTA
CGCGACGATA TCAAAGCCGA GTTCATCAAT GGTGAAGTTA TTATGCACTC GCCCGTAAAA
CGCAGGCATT TGGATGCGAC AGCTAACTTA ATGACCTTGC TACGCGTCTA TGTTCATCTC
AATAATTTGG GGGCTGTCGA TTCTAAGAAA GCCCTTATTG GATTGACCCG GAATGACTAC
GAGCCGGATA TTTGTTTCTG GCGGAGCGAA ACGGCCGACT CTTTTGACGA TGATCAGATG
GAGCACCCTG CACCGGATTT GATCGTTGAA ATCCTGTCGA AAAGCACAAC AGGACGTGAT
AGAGGGATTA AATTCGAAGA CTATGCGGCT CATGGCGTCG TTGAATACTG GATTATTGAC
CCGGTTCGCA AATCGGTAGA ACAATACCAG TTGGACGAAG CAACAATGGC CTTTGCCTCT
GTCGCGGTTG TTTATATAGA TAATACCCTA ATTGCCCTGA CAATCCCGGG CTTCTTAATT
CCGGTGAAAG CCATTTTCGA TAAGCAGACG AATCTGGAGA CGTTAAGAAT TCTAATGAAT
CTGTCTGCTT AA
 
Protein sequence
MLDTRVAELL EAPDAKLVIE RAQAILADEA QRRRAFREWL RDDIKAEFIN GEVIMHSPVK 
RRHLDATANL MTLLRVYVHL NNLGAVDSKK ALIGLTRNDY EPDICFWRSE TADSFDDDQM
EHPAPDLIVE ILSKSTTGRD RGIKFEDYAA HGVVEYWIID PVRKSVEQYQ LDEATMAFAS
VAVVYIDNTL IALTIPGFLI PVKAIFDKQT NLETLRILMN LSA