Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1327 |
Symbol | |
ID | 8725060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1624444 |
End bp | 1625115 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | protein of unknown function DUF820 |
Protein accession | YP_003386176 |
Protein GI | 284036246 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.621558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.19062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATA CCCGCGTTGC CGAATTATTA GAAGCCCCCG ATGCCAAATT GGTCATTGAG CGGGCGCAGG CTATTCTGGC CGATGAAGCC CAACGTCGCC GGGCGTTTCG AGAATGGCTA CGCGACGATA TCAAAGCCGA GTTCATCAAT GGTGAAGTTA TTATGCACTC GCCCGTAAAA CGCAGGCATT TGGATGCGAC AGCTAACTTA ATGACCTTGC TACGCGTCTA TGTTCATCTC AATAATTTGG GGGCTGTCGA TTCTAAGAAA GCCCTTATTG GATTGACCCG GAATGACTAC GAGCCGGATA TTTGTTTCTG GCGGAGCGAA ACGGCCGACT CTTTTGACGA TGATCAGATG GAGCACCCTG CACCGGATTT GATCGTTGAA ATCCTGTCGA AAAGCACAAC AGGACGTGAT AGAGGGATTA AATTCGAAGA CTATGCGGCT CATGGCGTCG TTGAATACTG GATTATTGAC CCGGTTCGCA AATCGGTAGA ACAATACCAG TTGGACGAAG CAACAATGGC CTTTGCCTCT GTCGCGGTTG TTTATATAGA TAATACCCTA ATTGCCCTGA CAATCCCGGG CTTCTTAATT CCGGTGAAAG CCATTTTCGA TAAGCAGACG AATCTGGAGA CGTTAAGAAT TCTAATGAAT CTGTCTGCTT AA
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Protein sequence | MLDTRVAELL EAPDAKLVIE RAQAILADEA QRRRAFREWL RDDIKAEFIN GEVIMHSPVK RRHLDATANL MTLLRVYVHL NNLGAVDSKK ALIGLTRNDY EPDICFWRSE TADSFDDDQM EHPAPDLIVE ILSKSTTGRD RGIKFEDYAA HGVVEYWIID PVRKSVEQYQ LDEATMAFAS VAVVYIDNTL IALTIPGFLI PVKAIFDKQT NLETLRILMN LSA
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