Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1288 |
Symbol | |
ID | 8725021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1584105 |
End bp | 1584656 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003386137 |
Protein GI | 284036207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.40806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGA CTTTATCTGA CGAAGACATG ATTCGTCACT ATCTGCCCCA TGAGCCAAAT AGTTGTTTCG AAGTATTGTA CAAGCGTTAC GAGGCCAAAG TATATCGACA TTGTTTGTCA ATGATAAAAG ATGCCGATCA GGCTCAGGAC TTTACGCACG ACATATTTTT GAAAGTTTTT GTTAAACTCA ATGCTTTTCA GGAACGCTCT AGTTTTTCAA CCTGGTTATA TACAATTGTA AGTAATCATT GCCTGGATCA GATTAGAATA GCCAAACGTT TAAGCTTAAG CTCAATTGAT GATGATTCGC AGCTAAGTGT ACCCGACTCA AATTTGGCGC ATATTCAGGA AGATAAACTT CAGCTTTTAA GGGTGGCTAT GAATTCACTA GCTGTTAAAG AACAAACATT ACTTCGATTA AAATACGAAC AGGGGCTAAG TATTGATGAT ATTGCCAAAT TGTACGCTAT CACATCAAGC GCCGTTAAAA TGCGTCTTAA ACGTAGCCGG GAAAAAGTAC AGTTGATGTA TGCTAAACAA AATAAACTTT AA
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Protein sequence | MNTTLSDEDM IRHYLPHEPN SCFEVLYKRY EAKVYRHCLS MIKDADQAQD FTHDIFLKVF VKLNAFQERS SFSTWLYTIV SNHCLDQIRI AKRLSLSSID DDSQLSVPDS NLAHIQEDKL QLLRVAMNSL AVKEQTLLRL KYEQGLSIDD IAKLYAITSS AVKMRLKRSR EKVQLMYAKQ NKL
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