Gene Slin_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1288 
Symbol 
ID8725021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1584105 
End bp1584656 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content37% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003386137 
Protein GI284036207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.40806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA CTTTATCTGA CGAAGACATG ATTCGTCACT ATCTGCCCCA TGAGCCAAAT 
AGTTGTTTCG AAGTATTGTA CAAGCGTTAC GAGGCCAAAG TATATCGACA TTGTTTGTCA
ATGATAAAAG ATGCCGATCA GGCTCAGGAC TTTACGCACG ACATATTTTT GAAAGTTTTT
GTTAAACTCA ATGCTTTTCA GGAACGCTCT AGTTTTTCAA CCTGGTTATA TACAATTGTA
AGTAATCATT GCCTGGATCA GATTAGAATA GCCAAACGTT TAAGCTTAAG CTCAATTGAT
GATGATTCGC AGCTAAGTGT ACCCGACTCA AATTTGGCGC ATATTCAGGA AGATAAACTT
CAGCTTTTAA GGGTGGCTAT GAATTCACTA GCTGTTAAAG AACAAACATT ACTTCGATTA
AAATACGAAC AGGGGCTAAG TATTGATGAT ATTGCCAAAT TGTACGCTAT CACATCAAGC
GCCGTTAAAA TGCGTCTTAA ACGTAGCCGG GAAAAAGTAC AGTTGATGTA TGCTAAACAA
AATAAACTTT AA
 
Protein sequence
MNTTLSDEDM IRHYLPHEPN SCFEVLYKRY EAKVYRHCLS MIKDADQAQD FTHDIFLKVF 
VKLNAFQERS SFSTWLYTIV SNHCLDQIRI AKRLSLSSID DDSQLSVPDS NLAHIQEDKL
QLLRVAMNSL AVKEQTLLRL KYEQGLSIDD IAKLYAITSS AVKMRLKRSR EKVQLMYAKQ
NKL