Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1245 |
Symbol | |
ID | 8724978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1519211 |
End bp | 1519879 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | KDPG and KHG aldolase |
Protein accession | YP_003386094 |
Protein GI | 284036164 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.423812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0447997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TCACTTCCGA AAAAATCCTC GACCTGGTCA GTAATCACCC GATTGTACCG GTTTTTTACC ATCCTGACAT CGCCCATGCC CAGTCTATCG TTCAGGCTTG CTATGATGGC GGTCTTCGGG TGTTTGAATT CACTAACCGG GGCGAGATGG CCCTGCCCGT TTTTACCGAT CTGGTGAAAT ACGTACGCGC CAACTGCCCC GATATGGCTA TGGGCATTGG CACCATCCTT ACCCCCGCCG ACACTGAACT GTTTCTGGAT GCCGGTGCTG ACTTTGTGGT GCAACCTGTT ACGACAGCCG CCGTGGGTGA TGTTTGCCGC GAGCGAGGTG TATCCTGGGT TCCGGCGGGT TCAACGCTGA ATGAACTGTA TCAGGCCACG GTGCTGGGTG CCGATTTGGT AAAAGTGTTT CCCGGCAACG TGGTTGGTCC GGGCTTCATC AAAGCCATCA AAGGCCCCAT GCCGGGTCTT AAACTTATGG TAACGGGTGG CGTTGAACCC ACCACGGATA GCCTGACGGC CTGGTTTCAG GCGGGCGTGA CGGCCGTAGG CATTGGCTCA CAATTGTTTT CGGGTCAGAA TCTAACCCCC GAAGCCCTAA AGGAACGGGT AGCCTCTTTG GTTCAGCATG TTTCATCCTT TACGTCTAAA TCCGCATGA
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Protein sequence | MSAFTSEKIL DLVSNHPIVP VFYHPDIAHA QSIVQACYDG GLRVFEFTNR GEMALPVFTD LVKYVRANCP DMAMGIGTIL TPADTELFLD AGADFVVQPV TTAAVGDVCR ERGVSWVPAG STLNELYQAT VLGADLVKVF PGNVVGPGFI KAIKGPMPGL KLMVTGGVEP TTDSLTAWFQ AGVTAVGIGS QLFSGQNLTP EALKERVASL VQHVSSFTSK SA
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