Gene Slin_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1245 
Symbol 
ID8724978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1519211 
End bp1519879 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID 
ProductKDPG and KHG aldolase 
Protein accessionYP_003386094 
Protein GI284036164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.423812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0447997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT TCACTTCCGA AAAAATCCTC GACCTGGTCA GTAATCACCC GATTGTACCG 
GTTTTTTACC ATCCTGACAT CGCCCATGCC CAGTCTATCG TTCAGGCTTG CTATGATGGC
GGTCTTCGGG TGTTTGAATT CACTAACCGG GGCGAGATGG CCCTGCCCGT TTTTACCGAT
CTGGTGAAAT ACGTACGCGC CAACTGCCCC GATATGGCTA TGGGCATTGG CACCATCCTT
ACCCCCGCCG ACACTGAACT GTTTCTGGAT GCCGGTGCTG ACTTTGTGGT GCAACCTGTT
ACGACAGCCG CCGTGGGTGA TGTTTGCCGC GAGCGAGGTG TATCCTGGGT TCCGGCGGGT
TCAACGCTGA ATGAACTGTA TCAGGCCACG GTGCTGGGTG CCGATTTGGT AAAAGTGTTT
CCCGGCAACG TGGTTGGTCC GGGCTTCATC AAAGCCATCA AAGGCCCCAT GCCGGGTCTT
AAACTTATGG TAACGGGTGG CGTTGAACCC ACCACGGATA GCCTGACGGC CTGGTTTCAG
GCGGGCGTGA CGGCCGTAGG CATTGGCTCA CAATTGTTTT CGGGTCAGAA TCTAACCCCC
GAAGCCCTAA AGGAACGGGT AGCCTCTTTG GTTCAGCATG TTTCATCCTT TACGTCTAAA
TCCGCATGA
 
Protein sequence
MSAFTSEKIL DLVSNHPIVP VFYHPDIAHA QSIVQACYDG GLRVFEFTNR GEMALPVFTD 
LVKYVRANCP DMAMGIGTIL TPADTELFLD AGADFVVQPV TTAAVGDVCR ERGVSWVPAG
STLNELYQAT VLGADLVKVF PGNVVGPGFI KAIKGPMPGL KLMVTGGVEP TTDSLTAWFQ
AGVTAVGIGS QLFSGQNLTP EALKERVASL VQHVSSFTSK SA