Gene Slin_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1236 
Symbol 
ID8724969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1508087 
End bp1508788 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content52% 
IMG OID 
Productclass II aldolase/adducin family protein 
Protein accessionYP_003386085 
Protein GI284036155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0903016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTATA CATCCCTAAA AGAAGAATGT TACGAGGCTA ATATGCAGCT TCCCAAGCTG 
GGGCTGGTGC TGTTTACGTT CGGGAATGTT AGCGCGGTTG ACCGCGAGCG GGCGGTGTTT
GCCATCAAAC CCAGCGGAGT TCCGTATGAA AAGCTGACGG CCGACGATAT TGTCATCTGC
GATTATGAGG GTCGTGTTGT TGAGGGTCAG TTGCGGCCCT CATCCGATAC AAAAACCCAC
GCGCTGCTCT ATAAAACCTG GGATACCCTG GGAGGCATTT CCCATACCCA CAGTACTCAC
GCCGTAGCCT GGTCGCAGGC GGGCATGGAT ATTCCGATTT TCGGAACCAC GCACGCTGAC
CATACGCACC AGGATATCCC CTGCGCCCCG GCGCTGACCG ATGAGATGAT TCAGGGCGAT
TATGAGCACG AAACGGGCCA CCAGATCTTT AACTGCTTCT CCGAAAAAGG GTTGGTCCAT
ACGGAAATGG AAATGGTCCT ACTGCAAAAT CACGGGCCGT TTACGTGGGG CAAATCGGCC
GAGAAAGCCG TTTACAACTC CGCTGTATTG GAAGAACTGG CCCGAATGGC GTATCTAACC
TTACAAATTA ACCCCAATAC ACCCCGCATC AAGGATACGT TACGATTAAA ACACTACGAG
CGCAAACACG GCAAAAACGC CTACTACGGA CAGGGTTGCT AG
 
Protein sequence
MMYTSLKEEC YEANMQLPKL GLVLFTFGNV SAVDRERAVF AIKPSGVPYE KLTADDIVIC 
DYEGRVVEGQ LRPSSDTKTH ALLYKTWDTL GGISHTHSTH AVAWSQAGMD IPIFGTTHAD
HTHQDIPCAP ALTDEMIQGD YEHETGHQIF NCFSEKGLVH TEMEMVLLQN HGPFTWGKSA
EKAVYNSAVL EELARMAYLT LQINPNTPRI KDTLRLKHYE RKHGKNAYYG QGC