Gene Slin_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1193 
Symbol 
ID8724926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1453023 
End bp1454495 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content53% 
IMG OID 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_003386043 
Protein GI284036113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAG ATACCAGTAA ATTTCTTTAC GAGGCTCTCA CCTACGACGA CGTACTGCTG 
CTACCCGCCT ATTCGGAGGT TCTCCCACGC GATACGCAAA CCGTTGCCCA ACTTACCCGC
AACATCCGGC TAAACGTTCC ACTCATTTCG GCGGCAATGG ACACCGTTAC TGAGTCGGCA
TTGGCTATTG CGATGGCGCA GGAAGGCGGT ATCGGCATTA TCCACAAGAA TATGAGCATT
GAGGCTCAGG CCGACCAGGT TCGGAAAGTC AAGCGCTCGG AAAGTGGGAT GATCATCGAT
CCCATCACAC TTCTTGAAAC GGCTACTTTA GGCGACGCGC ATAAAATCAT GCGCGAGTTT
AAAATTGGCG GTATCCCGGT TATCGACGAA TCGGGTAAGC TGGTTGGCAT CCTGACCAAC
CGTGATCTGC GGTTTCAGCA CGACATGACT AAGCCCGTTA CGGCTGTAAT GACGCAAAAA
AACCTGATTA CAGCCCGGGA AGGCCTAACG CTCGAAGAAG CGGAGACGAT CCTTCAGCAG
CACCGGATTG AAAAACTGCC GATTGTCAAT GACACCTACC AGTTAGTCGG TCTGATTACC
TACAAAGACA TTCTGAAGAA AAAGAGCCAT CCTAACGCCT GCAAAGACGA ACTGGGGCGC
TTACGCGTGG GCGCTGCCGT TGGCGTTACG CCTGATTTGC ACCGGCGTAT CGAAGCGCTT
GTGAAGGCGG GCGTAGACGT GATCAGTGTC GACACCGCCC ACGGTCACTC GAAGGGTGTT
CTGGACGCCG TTCGGGGAAT TAAGGAACTG TTCCCCAAAC TACAGGTCAT TGCTGGAAAC
GTAGCCACTG GTGAAGGGGC TAAAGCCCTG GCTGAGGCTG GTGCCGATGC GGTAAAGGTG
GGCGTAGGGC CGGGCAGTAT CTGCACCACC CGAATCATTG CCGGTATCGG TATGCCGCAG
CTGACGGCCG TTTATGAGTC AGCAAAAGCC TTACAGGGCA CGGGTGTTCC GGTCATTGCT
GACGGCGGTA TTCGCTTTTC GGGCGATATT ACCAAAGCCA TTGCCGGAGG AGCCAGCACC
GTCATGATTG GTTCGCTTCT GGCGGGTACT GAAGAGGCCC CCGGCGAAGT TGTGCTTTAT
GAAGGTCGGC GGTTCAAGAC GTACCGGGGT ATGGGCTCAG TCGAAGCTAT GGAAGATGGC
TCGAAGGATC GCTATTTTCA GGATGCGGAA GATGACATCA AGAAACTGGT ACCCGAAGGC
ATCGTTGGCC GCGTACCGGT CAAAGGTAAA GTCTCGGAAA TTATATACCA GATGGTTGGT
GGGCTGAAAG CTGGGATGGG GTATTGTGGC GCCATTGATA TTCCGACGCT TCAGCAGGCT
AAATTTGTAA AAATCACCAC AGCTGGTTCG CGCGAAAGTC ACCCGCACGA TATTCAGATT
CAGAAAGAAG CTCCGAATTA TTCGGCACGG TAA
 
Protein sequence
MSLDTSKFLY EALTYDDVLL LPAYSEVLPR DTQTVAQLTR NIRLNVPLIS AAMDTVTESA 
LAIAMAQEGG IGIIHKNMSI EAQADQVRKV KRSESGMIID PITLLETATL GDAHKIMREF
KIGGIPVIDE SGKLVGILTN RDLRFQHDMT KPVTAVMTQK NLITAREGLT LEEAETILQQ
HRIEKLPIVN DTYQLVGLIT YKDILKKKSH PNACKDELGR LRVGAAVGVT PDLHRRIEAL
VKAGVDVISV DTAHGHSKGV LDAVRGIKEL FPKLQVIAGN VATGEGAKAL AEAGADAVKV
GVGPGSICTT RIIAGIGMPQ LTAVYESAKA LQGTGVPVIA DGGIRFSGDI TKAIAGGAST
VMIGSLLAGT EEAPGEVVLY EGRRFKTYRG MGSVEAMEDG SKDRYFQDAE DDIKKLVPEG
IVGRVPVKGK VSEIIYQMVG GLKAGMGYCG AIDIPTLQQA KFVKITTAGS RESHPHDIQI
QKEAPNYSAR