Gene Slin_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1175 
Symbol 
ID8724908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1434307 
End bp1435350 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content50% 
IMG OID 
ProductS-adenosylmethionine/ tRNA-ribosyltransferase-isomerase 
Protein accessionYP_003386025 
Protein GI284036095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAT CCGAATTCAA ATTTGATTTA CCCGAAAGTC TTATCGCCAA ATACCCGGTC 
GAGCGGGGTG AATCACGGTT GATGGTTGTC GACCGAAAAG CGAAAACTAT TGAACACAAG
CAGTTTTCGG ATATGCTGAG TTACTTCGGC GATGGCGATG TGATGGTGAT CAATAACACA
AAAGTTTTTC CCGCCCGCCT GTATGGCAAT AAAGAAAAAA CGGGTGCTAA GATTGAAGTT
TTCCTCCTGC GCGAACTGAA CCGCGAGATG AAACTCTGGG ATGTGCTGGT TGATCCGGCC
CGCAAAATCC GCGTTGGCAA TAAACTCTAT TTTGGAGATA GTGACCTCGT TGCTGAAGTC
ATTGACAATA CAACCTCACG CGGTCGGACA ATCCGCTTTC TGTTCGACGG CAACCACGAG
GAATTTATGA AAGCAGTGGA CGAACTGGGC GAAACACCCA TTCCCCGCGA AATGAACCGG
GAAGCCGAAG ACGCTGACCG CGACGCCTAT CAGACGGTGT TTGCCCAGCA TGTTGGTGCA
GTAGCAGCCC CTACGGCCGG TCTGCACTTT ACCCGCGCCA TGATGAAGCG CATGGAAATT
AAAGGGATCA ACTTTGCGCC TGTTACACTG CACGTTGGCT TAGGAACGTT CCGTCAGGTT
GACGTAGAAG ACCTTACAAA GCACAAGACA GATTCCGAAA ATTACCGGAT TCCCGAAGAT
TCAGCCCAGA TCGTGAACAA GGCGCTTGAT GCCGGTAAGC GGGTTTGCGC CGTGGGTACA
ACTTCCCTGA AAGCCATCGA GTCGTCGGTG TCGGCCAATA GCCGGTTGAA GCCCGTTGAA
GGCTGGACGG ACCGGTTTAT TTTCCCGCCT TACGATTTTA AAATCGCCAA TTCTCTGCTG
ACGAGCCTTC ACCTGCCCGA GTCCATCCTG ATCATGATGA CTAGTGCGTT TGGTGGCCAT
GAACTCATTA AGGAAGCCTA TCAGGTAGCG ATTAAAGAGA AATATCGTTT CTTCAGCTAC
GGCGATGCCA TGCTTATTAT TTAA
 
Protein sequence
MKLSEFKFDL PESLIAKYPV ERGESRLMVV DRKAKTIEHK QFSDMLSYFG DGDVMVINNT 
KVFPARLYGN KEKTGAKIEV FLLRELNREM KLWDVLVDPA RKIRVGNKLY FGDSDLVAEV
IDNTTSRGRT IRFLFDGNHE EFMKAVDELG ETPIPREMNR EAEDADRDAY QTVFAQHVGA
VAAPTAGLHF TRAMMKRMEI KGINFAPVTL HVGLGTFRQV DVEDLTKHKT DSENYRIPED
SAQIVNKALD AGKRVCAVGT TSLKAIESSV SANSRLKPVE GWTDRFIFPP YDFKIANSLL
TSLHLPESIL IMMTSAFGGH ELIKEAYQVA IKEKYRFFSY GDAMLII