Gene Slin_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1174 
Symbol 
ID8724907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1433507 
End bp1434235 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content54% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D- erythritolsynthase 
Protein accessionYP_003386024 
Protein GI284036094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC CCTTACTACC TACTACTAAT TTTTTTGCCA TCATCGTTGC CGGCGGCAGT 
GGCAGCCGAA TGAAGTCGGA CGTACCCAAA CAGTTTCTGC TTCTCAACGG CAAACCCATC
CTTCAGCATA CTATCGAACA ATTTCTGGCG GTTCAACTCC CCGCCCGGCC TTTGTCCTCT
CAGACAACGG AAATGACCGT ATCCGCCCAG CGTTCGACGG TCAGCATTAT TGTTGTACTA
CCCGCCCGGG ATATACCCAT CTGGAATAAA CTGTGTGAAG AGCACAATTT CCATCCTGAC
ATTCAGACGG TCATTGGCGG CAACAGCCGA TTTCAGTCGG TACGCAACGG GCTTCAGGCG
ATAGACGCTC CCGATGGGTT AGTGGCGGTT CACGATGGTG TCCGGCCTTT TGTCACGCCC
GATATTATTC AGGCTGGTTT TGAAACGGCC GCCCGGACCG GTTCAGCTGT AACCTGTGTG
CCGGTTAAGG ATTCGGTACG TGTTGTTGGA GCAGATGGCA TTAGCCGTGC CGTCGACCGC
GCTCAATACC GACTGGTGCA AACGCCCCAA ACCTTTCGAC TGGGCCTGTT CCGGCAGGCT
TTTCAAAGCG AGGAGCAGGC TTTCTTCACC GACTGCGCCA GCGTTGTCGA GTTTGCCGGT
TTCCCAATCA CGCTGATTGA TGGCGCTTAC GAAAACATCA AAATTACCAC CCCGGACGAC
TTAAGGTAA
 
Protein sequence
MTDPLLPTTN FFAIIVAGGS GSRMKSDVPK QFLLLNGKPI LQHTIEQFLA VQLPARPLSS 
QTTEMTVSAQ RSTVSIIVVL PARDIPIWNK LCEEHNFHPD IQTVIGGNSR FQSVRNGLQA
IDAPDGLVAV HDGVRPFVTP DIIQAGFETA ARTGSAVTCV PVKDSVRVVG ADGISRAVDR
AQYRLVQTPQ TFRLGLFRQA FQSEEQAFFT DCASVVEFAG FPITLIDGAY ENIKITTPDD
LR