Gene Slin_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1142 
Symbol 
ID8724875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1395686 
End bp1396111 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003385992 
Protein GI284036062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.343255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.597064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC TCACCAATCG TGGCCCGGCC GAAAAGATAC GCTTACAACG GCTTCAGCGG 
GGTTTATCGC AGGAAAACAT GGCCGATCTA CTCAATCTGT CCACGACGGC CTACGGCGAT
ATTGAACGCG GCAAAACTGA CCTAACCCTC TCCCGACTCA GCCAGATAGC GAACGTTTTG
GCTATTTCGC CCCTCGCCCT GCTCACCGAC GAAGCCATTC CGGCGCAGGT TGTAGAGGAA
AAATCGGAGG AAGTGGCCAG TCATGAACTC GAAACATTAC GCCTTGTCGT CGAAAAGCAA
CAGTTGGAGT TGGACAAGCT CCGTCTGGAA GCCGACTACT GGAAACGCAA ATACGACGAC
CGTATCGCCA TGGAAGTGCT ACGCTCGATG GGCGTGGAGC AGAAGCGCGA GCGGATTGGG
TTTTGA
 
Protein sequence
MSTLTNRGPA EKIRLQRLQR GLSQENMADL LNLSTTAYGD IERGKTDLTL SRLSQIANVL 
AISPLALLTD EAIPAQVVEE KSEEVASHEL ETLRLVVEKQ QLELDKLRLE ADYWKRKYDD
RIAMEVLRSM GVEQKRERIG F