Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1128 |
Symbol | |
ID | 8724861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1378373 |
End bp | 1379407 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003385978 |
Protein GI | 284036048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTA AAACCAACGA CTCTCTCTCT GTTGGCTCTA TCAACCTCAT CCTGTTTGCG GCCCGCCAGC AGGGAGCCGA TGCCGATGCA CTGGCCCGCG CGGTAGGTAT CGACGCAGCT CAACTTAAGA ACCCGGACGG GCGGGTACTC ATTCAGCAGG TGCAGGCCCT CTGGCACGAA GCCATTATCG CGACGAACGA TCCTGCTCTC CCGCTCAAAC TGGGCGAAAT GGTAAACCCG CTGGCTCTTG GGGTACTGGC CTACGTGATG ATGCACTGTC CTACACTTGG GCACGTATTT GATAAGCTTT GCCACTACCA GGATATCGTC TGCGAAGGCG TCCAAACAAC GGGGCAGCTC ATTCCGGCCG ACGACAAATC GGGCGCAAAG TACGTCTTAT CGCTACGCAT CACCAGCCCT GACATTATCT ACCCGGAACA TACCTTTAAC TCCGAGCTGT CGATCTATAT GTCGGTCATT CGTGCCCTCA CGGGTCAGCG CCTGACCGCG CTTGAAACGC ATTTTGCTTA CCCGCGTCCA AGCGACACGC GCGAACATGA ACGCGTGTTC GACCCTACCC TTCTCTTGTT TGATGCCAGC GAAACCACCC TGGTCTTCGA TGCGGCCCTA CTGGACACGC CCGTTCTCAA TGCCAATCCC AGCCTGTTCC CGTTATTTGA GAAACACGCC AACGATATAC TGAACCAACT CCATACACCC TCGCTGAAGA GTCGGGTGAA AGCCGAGATT GTCTCGCTGA TGAAAGGTGA AGAGCCCACC CTGGTCAGCG TTGCCGACCG GCTGGCGATG GGCGTACGAA CCTTGCAGCT TCACCTCAAA GAATCGGGCA CATCGTATCA GCAGCTCCTC GACGAAACCC GCAAAGAACT TGCCATTGGG CACCTGCGCG AACCGAATGT GAGCACAACA GACATTGCCT ATCTGCTGGG TTTTGCCGAA CCCAGCGTTT TTTTCCGTTC CTTTAAAAAA TGGACGGGCC AGACGCCGGG TGCATACCGG CTAGCCTACG CCTAG
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Protein sequence | MQPKTNDSLS VGSINLILFA ARQQGADADA LARAVGIDAA QLKNPDGRVL IQQVQALWHE AIIATNDPAL PLKLGEMVNP LALGVLAYVM MHCPTLGHVF DKLCHYQDIV CEGVQTTGQL IPADDKSGAK YVLSLRITSP DIIYPEHTFN SELSIYMSVI RALTGQRLTA LETHFAYPRP SDTREHERVF DPTLLLFDAS ETTLVFDAAL LDTPVLNANP SLFPLFEKHA NDILNQLHTP SLKSRVKAEI VSLMKGEEPT LVSVADRLAM GVRTLQLHLK ESGTSYQQLL DETRKELAIG HLREPNVSTT DIAYLLGFAE PSVFFRSFKK WTGQTPGAYR LAYA
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