Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1127 |
Symbol | |
ID | 8724860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1376908 |
End bp | 1378347 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Alpha-L-fucosidase |
Protein accession | YP_003385977 |
Protein GI | 284036047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.95278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC AAATTACCTC CATTCTCTTC AGCTTACTGG TTTCGACATC GGCTCTGGCG CAACAGCACT CGGAGCAGAA TCACGATAAA TACGTCTGGC CCAAAGATGA ACTGGTAAAG AAAAAACTGG CGAACTGGCA GGATATTAAG TTTGGCCTGC TCATGCACTG GGGCACTTAC AGCGAGTGGG GCGTGGTGGA ATCGTGGTCA CTGTGCCCCG AAGATGAAGG CTGGTGCGAA CGCAGAGGCC CCTATGCGGC CAATTGGTTC GAGTATAAAA AAGCGTACGA AAATCTGCAA ACAACTTTCA ACCCTACCAA ATTCAATCCC GAACGCTGGG CCAATGCAGC AAAAGGGGCG GGCATGAAAT ACGTGGTTTT CACCACCAAA CACCACGACG GCTTTTGCAT GTTCGACACC AAGCTGACGG ACTATAAGAT CACTGATAAG AAAACCCCGT TCTCATCGAA TCCGCGCAGT AACGTCACAA AAGAGATTCT TGGTGCTTTT CGTCAGCAGG GCTTTATGGT CGGCACGTAT TTTTCCAAAC CCGATTGGCA TACCGAAGAT TACTGGTGGA CGTACTTTCC GCCCAAAGAT CGTAACGTAA GCTACGACCC GAAAAAATAC CCCGACCACT GGAAGAAGTT CAGCGATTTC ACCTATAACC AGATCGAAGA ACTAATGACC GGTTACGGCA ACGTCGATAT TCTGTGGCTC GACGGCGGCT GGGTTCGTCC GGCCAGCACC ATCGACTCAA CCGTTAGTTG GCAGCGCACG ATCCCATACA GCCAGGATAT AAACATGGCA CGCATTGCCG GTATGGCGCG CCAGCATCAG CCGGGCCTTC TGGTTGTTGA CCGGACGGTA TCGGGCGAAT TCGAGAATTA CGTCACCCCG GAACAGTCTA TCCCCGACCA TTACATGCCC ATTCCCTGGG AAAGCTGCAT CACTATGGGC GATAGTTGGT CGTACATCCC TAAGGAGAAT TTCAAACCCG CCCGTAAACT GGTTCAGACA TTGGTTGATA TCGTAGCCAA AAACGGGAAT CTCTTACTTA ACATTGCCCC CGGCCCCGAT GGCGAATGGC ACGAAGAAGC CTATCAGCGA TTGCAGGAAA TTGGCAAATG GATAACCGTA AACGGCGAGT CGATTTACGG CACCAAACCG TTGGCTCCCT ACCGGCAAGG GCAATGGGCG TTCACCTCGA ACAATAAGGC TGTTTATGCC TCCTACCTGC CCAGCGAGTC GGAACAGCAG CTTCCGGCCA GCATTTCATT ACCGGCGCTT ACCGTTGCGC CCAATGCTAA AGTGACCGTA CTGGGTGCAT CACAGGCCTT GAAGCTGACC AAAACAAAGG ATGGTTTCAG CGTTGTCGTT CCCGAGAAGG TACGTCAGCA ATTGGCTGGT CAACCCGTTT GGGTATTTAA AATTGGCTAA
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Protein sequence | MKKQITSILF SLLVSTSALA QQHSEQNHDK YVWPKDELVK KKLANWQDIK FGLLMHWGTY SEWGVVESWS LCPEDEGWCE RRGPYAANWF EYKKAYENLQ TTFNPTKFNP ERWANAAKGA GMKYVVFTTK HHDGFCMFDT KLTDYKITDK KTPFSSNPRS NVTKEILGAF RQQGFMVGTY FSKPDWHTED YWWTYFPPKD RNVSYDPKKY PDHWKKFSDF TYNQIEELMT GYGNVDILWL DGGWVRPAST IDSTVSWQRT IPYSQDINMA RIAGMARQHQ PGLLVVDRTV SGEFENYVTP EQSIPDHYMP IPWESCITMG DSWSYIPKEN FKPARKLVQT LVDIVAKNGN LLLNIAPGPD GEWHEEAYQR LQEIGKWITV NGESIYGTKP LAPYRQGQWA FTSNNKAVYA SYLPSESEQQ LPASISLPAL TVAPNAKVTV LGASQALKLT KTKDGFSVVV PEKVRQQLAG QPVWVFKIG
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