Gene Slin_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1073 
Symbol 
ID8724803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1309795 
End bp1310886 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content52% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003385923 
Protein GI284035993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.662635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.844475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA CCTACTTTAC GCCCGGCCCG GCCGAGTTAT ATCCAACGTT TTATCAACAC 
CTGCAAACCG CCATGGACGA GCAGATTGGC TCGATCTCGC ATCGGAGTCA GCGGTTTCGG
GACATCTACA AGTTTGCCGA TGAACAACTG CGAACGTTAC TGAGTATTCC GTCAACGCAT
GGTATCTTCT TCACGGGATC GGCTTCGGAA GTATGGGAGC GGGTATTGCT CAACTGCGTG
GAGCACGAAA GCTTTCACCT CGTCAATGGC TCGTTTTCTC AAAAGTTCTA CGATTATGCC
AACGCCCTGC ACAAACACGC GCATGTACTC GAAAAACCGT TTGGCGAAGG ATTCGATGCT
GCCGATGTGG AGGTTCCTGC TTACGCGGAA CTGGTTTGCC TGACCCATAA CGAAACCTCG
TCGGGTGTGC AGATGCGGAC GAGCGAAATG CACAAACTAA AGCGGAAGTA CCCCAAGAAG
TTATTCTGTA TTGACACCGT TTCCTCAGCC CCCTACCCCG ACCTGGATTT TAACCTGATC
GACTCGGCGT TTTTCTCGGT TCAGAAAGCG TTTGGTATGC CAGCCGGTCT GGGCGTCTGG
ATTGCCAGCC AGAACTGTCT GGCCAAAGCC GAACGGTTGG AAAAGAACGA CGCGCTAACC
ATTGGCGCGC ACCACACGCT GCCCACGCTT TGGAAGCATT ACAAAACGTT TGAAACACCC
GCCACGCCCA ACGTGCTGTA CATCTATATT CTGGGAAAGA TCGCGGAAGA TTTTAACCGG
ATTGGTATCG ACACCATGCG AAAGCAGACG GAAGAAAAGG CCCGGATGCT CTATAAATTC
CTGGAAACGT CCGATACCTT ATCGCCCTTT GTGAGTCAGG AACGGCACCG TTCGCAGACG
GTCATTGTGG CAACCACCGG AACGGCCGAT AAGCCAAAAT CATCAGGCGA TGTCATGGCC
GCAACGAAAG CTGTCAACAT GATTGTGGGC AGCGGGTATG GGAAATTCAA AGATTCGCAA
ATTCGGATTG CCAACTTCCC AGCCGTCTCC ATCGAACAGG TAGCGGCATT AATCGATGAG
TTGAAGAAAT AG
 
Protein sequence
MNNTYFTPGP AELYPTFYQH LQTAMDEQIG SISHRSQRFR DIYKFADEQL RTLLSIPSTH 
GIFFTGSASE VWERVLLNCV EHESFHLVNG SFSQKFYDYA NALHKHAHVL EKPFGEGFDA
ADVEVPAYAE LVCLTHNETS SGVQMRTSEM HKLKRKYPKK LFCIDTVSSA PYPDLDFNLI
DSAFFSVQKA FGMPAGLGVW IASQNCLAKA ERLEKNDALT IGAHHTLPTL WKHYKTFETP
ATPNVLYIYI LGKIAEDFNR IGIDTMRKQT EEKARMLYKF LETSDTLSPF VSQERHRSQT
VIVATTGTAD KPKSSGDVMA ATKAVNMIVG SGYGKFKDSQ IRIANFPAVS IEQVAALIDE
LKK