Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1068 |
Symbol | |
ID | 8724798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1303950 |
End bp | 1305254 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003385918 |
Protein GI | 284035988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.391722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA GAACGGGTCC CAGAATTAAC CAGATTATCA TTACCCCCAT TGCCATTGTC GACCCTCCTC TATTGAACGC GGCCGGGCTG CACGCCCCCT ATGCCCTGCG AACCATTGTC GAGATTATTA CGGACGATAA CATTTCGGGG ATCAGCGAGA TACCGGGTAC TGCCGCCATT GATGCCTCCC TGAACGAATC CAGAGAGTTG CTCATTGGCC GGGATGTGTT TCAACTCAAC GAAATCAGGC AGGTGCTTGT CAACCGGTTT GGAACGGAGA GTGCCGCCCA ACGTGGGGAA GCCCCCTGGG ACCAGCGGAA ACTGGTGCAC ATTTTCAGCG CGATTGAAGT GGCCTGTCTC GATATTATCG GGAAAGTTAC GGGCCGTCCG GTTGTGGATT TGCTGGGCGG GAAAATGCGG GATCGGGTTC CTTTTTCGGC TTATCTGTTC TACAAATACG AAGGCGCTGG CGGGCCACTG GCGTTTGGTA CGGACCCGGC CGCGCAGGGA TGGGCAGCCG CCCGACAAGC CAGCGCCCTG AACCCCACCG AAATTGTGGC GCAGGCCAAA GCGATGTGCG CCGAGTTCGG ATTCCAGTCC ATCAAACTGA AAGGCGGGGT ATTCGAACCA CAGCAGGAGG TCGACGCAAT GTTTGCTCTG TATGAGGCTT TTGGCCCGGA CGTTCCCTTG CGGGTGGACC CCAACGCCCT TTGGACCGTT GAGACCGCTA TCAAACACGG ACGCCAGATG GAGCCGATTC TCGAATACCT CGAAGACCCG GTACGGGGTC AGAAAAACAT GGCGGAAGTC CGAAAAGCGA TAAAAACGCC ACTGGCAACG AATATGTGTA CAACCTCGTT CGAGGATATT CCCGCCAGTA TCGCCGTCGG CTCTGAAGAT ATTATTCTGA GCGATCACCA TTTCTGGGGT GGCCTTCGGG CGTCCATGAC GCTTTCGGGT ATTTGCGAAA CGTTCGGACG TGGCCTGTCG ATGCACTCCA ACAGCCATCT GGGTATTTCG CTGGCCGCGA TGGTTCACCT CGGTGCGGCT CTCCCCCAGG TGCCCTATGC ACTCGACACG CATTACCCCT GGCAGTCCGA TGAAATTATC ACCGCCGGTC GATTTACGTT CGAAGAAGGG GCTGTGCTTG TACCCCAGGA GCCAGGCCTG GGCGTCGAGC TTGACCGCGA AGCTCTGGCC CGACTACACC AGAATTACCT GACTTGCGGG CTCACAAAAC GGGATGATGA AATCGAAATG CAGAAAGTAC AACCCGGCTG GAAATTTCAG TCGGTGCGTT GGTAA
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Protein sequence | MNTRTGPRIN QIIITPIAIV DPPLLNAAGL HAPYALRTIV EIITDDNISG ISEIPGTAAI DASLNESREL LIGRDVFQLN EIRQVLVNRF GTESAAQRGE APWDQRKLVH IFSAIEVACL DIIGKVTGRP VVDLLGGKMR DRVPFSAYLF YKYEGAGGPL AFGTDPAAQG WAAARQASAL NPTEIVAQAK AMCAEFGFQS IKLKGGVFEP QQEVDAMFAL YEAFGPDVPL RVDPNALWTV ETAIKHGRQM EPILEYLEDP VRGQKNMAEV RKAIKTPLAT NMCTTSFEDI PASIAVGSED IILSDHHFWG GLRASMTLSG ICETFGRGLS MHSNSHLGIS LAAMVHLGAA LPQVPYALDT HYPWQSDEII TAGRFTFEEG AVLVPQEPGL GVELDREALA RLHQNYLTCG LTKRDDEIEM QKVQPGWKFQ SVRW
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