Gene Slin_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1068 
Symbol 
ID8724798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1303950 
End bp1305254 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003385918 
Protein GI284035988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.391722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA GAACGGGTCC CAGAATTAAC CAGATTATCA TTACCCCCAT TGCCATTGTC 
GACCCTCCTC TATTGAACGC GGCCGGGCTG CACGCCCCCT ATGCCCTGCG AACCATTGTC
GAGATTATTA CGGACGATAA CATTTCGGGG ATCAGCGAGA TACCGGGTAC TGCCGCCATT
GATGCCTCCC TGAACGAATC CAGAGAGTTG CTCATTGGCC GGGATGTGTT TCAACTCAAC
GAAATCAGGC AGGTGCTTGT CAACCGGTTT GGAACGGAGA GTGCCGCCCA ACGTGGGGAA
GCCCCCTGGG ACCAGCGGAA ACTGGTGCAC ATTTTCAGCG CGATTGAAGT GGCCTGTCTC
GATATTATCG GGAAAGTTAC GGGCCGTCCG GTTGTGGATT TGCTGGGCGG GAAAATGCGG
GATCGGGTTC CTTTTTCGGC TTATCTGTTC TACAAATACG AAGGCGCTGG CGGGCCACTG
GCGTTTGGTA CGGACCCGGC CGCGCAGGGA TGGGCAGCCG CCCGACAAGC CAGCGCCCTG
AACCCCACCG AAATTGTGGC GCAGGCCAAA GCGATGTGCG CCGAGTTCGG ATTCCAGTCC
ATCAAACTGA AAGGCGGGGT ATTCGAACCA CAGCAGGAGG TCGACGCAAT GTTTGCTCTG
TATGAGGCTT TTGGCCCGGA CGTTCCCTTG CGGGTGGACC CCAACGCCCT TTGGACCGTT
GAGACCGCTA TCAAACACGG ACGCCAGATG GAGCCGATTC TCGAATACCT CGAAGACCCG
GTACGGGGTC AGAAAAACAT GGCGGAAGTC CGAAAAGCGA TAAAAACGCC ACTGGCAACG
AATATGTGTA CAACCTCGTT CGAGGATATT CCCGCCAGTA TCGCCGTCGG CTCTGAAGAT
ATTATTCTGA GCGATCACCA TTTCTGGGGT GGCCTTCGGG CGTCCATGAC GCTTTCGGGT
ATTTGCGAAA CGTTCGGACG TGGCCTGTCG ATGCACTCCA ACAGCCATCT GGGTATTTCG
CTGGCCGCGA TGGTTCACCT CGGTGCGGCT CTCCCCCAGG TGCCCTATGC ACTCGACACG
CATTACCCCT GGCAGTCCGA TGAAATTATC ACCGCCGGTC GATTTACGTT CGAAGAAGGG
GCTGTGCTTG TACCCCAGGA GCCAGGCCTG GGCGTCGAGC TTGACCGCGA AGCTCTGGCC
CGACTACACC AGAATTACCT GACTTGCGGG CTCACAAAAC GGGATGATGA AATCGAAATG
CAGAAAGTAC AACCCGGCTG GAAATTTCAG TCGGTGCGTT GGTAA
 
Protein sequence
MNTRTGPRIN QIIITPIAIV DPPLLNAAGL HAPYALRTIV EIITDDNISG ISEIPGTAAI 
DASLNESREL LIGRDVFQLN EIRQVLVNRF GTESAAQRGE APWDQRKLVH IFSAIEVACL
DIIGKVTGRP VVDLLGGKMR DRVPFSAYLF YKYEGAGGPL AFGTDPAAQG WAAARQASAL
NPTEIVAQAK AMCAEFGFQS IKLKGGVFEP QQEVDAMFAL YEAFGPDVPL RVDPNALWTV
ETAIKHGRQM EPILEYLEDP VRGQKNMAEV RKAIKTPLAT NMCTTSFEDI PASIAVGSED
IILSDHHFWG GLRASMTLSG ICETFGRGLS MHSNSHLGIS LAAMVHLGAA LPQVPYALDT
HYPWQSDEII TAGRFTFEEG AVLVPQEPGL GVELDREALA RLHQNYLTCG LTKRDDEIEM
QKVQPGWKFQ SVRW