| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1039 |
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| Symbol | |
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| ID | 8724769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1263944 |
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| End bp | 1267723 |
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| Gene Length | 3780 bp |
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| Protein Length | 1259 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003385889 |
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| Protein GI | 284035959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGT TTTCGCAGTT TTGGTTTGAT GTTTCGCTGC AGGGAGTTGC GTTTGTTGAG
CCTGTCTACA CCGGAAATCC GGTGGTAACG ACGTTTCAGT ATAAACTGGT TAATAATGCA
TTTGCCAACA TTCTCAGACG GACCCGGGCC GACCTGACCG GGCAACCTGT GACCGGACTT
TTTCAGGATG AAGAAGATAA ATCATTTGTT AACCGACTGC TTACCAGTCT GCAAACTGGA
GAGCCACAAC AGTTTCATAA GCATGGCCGG TGCGCGGGTG AGGATGTGTG GTTCTACACT
ACAGTAACCC GGATGGACCA GCAACTGATG GTTAACATTC AGGATGTCAG TGAGCAGAAA
AAGTCAGAAT GCGAGTTACA GCAGCGCCTG GCCGTGGAGT CCATCCTGAC GGCTGTGTCG
GGCCGAATGA TCATCCTGGA AGCCGCAGAT CTGGACGCTT ATATGACAGA AGCTCTGGGG
CAGATCAGTA CCCACATTGG TGCCGAACGG GCCGTAGTGG TGCTGTACTC GGACGATTGT
CAGCGCGGAA GCTGTGCCCA TGAATGGTGC GCTCCGGGTA TCGAATTCCG AAAACAGGTT
AACCAGAATG TTCCCGTAAA TAGCTTTTCC TGGATGTACG AGCGGCTGGA AACCGGGCAG
CTTGTTCAGT TTAATGGCGA TGAAATGTTG CTCGACGCTA TCAATAGCCA AAGCATCTTT
AAGGCCATGG CGGTTCGTTC AATAATCGCT ATTCCACTAG TTCAGGAGCG AAAAACGCAG
GGCTTTATCG CTTTTTATAC CATCAGCCAG CCTCACCAGT GGAGACAGAG TGATATTTCG
CTCCTGCAAA CCTTTGGTAC GCTCATTATC AATCTATTTG GACGGCTAAA GCAGGAAACG
GCTATCAGAC GGGCAAATCA GCGATTAGAA GGCTTACATG AAATCGACCA GGCTCTATTA
AGTTCCCGTC TGTCCGATAA GCCGCCCCTG CTGATTGCCA TGAAGTATAT TCACTTTATG
GTGCCGTGTG AGCGGGTAAC GGTATTCCGG ATCGACGAGC ATACCCAACT TGCAGTGGCT
AAAAGTAGTC TGGTAGACGG AGTACCCGTC AGAAATCCGC GTCAGGTTAT AACCGAATCA
GACTTCTACG AACGGTTTTT ATCGAGTGAA GCGATTACCT ACCTTCCCGA TCTACGGCAA
GAAAGAACAG GTATGCCGCC TGAGTTAAGC GCGAGCCTGA TCGAAGAAGG GTTTCAGTCA
TTCGTTATTA TCCCTTTGTT TAGTCGGCAG GAATGCATAG GGGCGTTGAC GCTGGCTTCG
GCCAGGCCAT ATTTCTTCAC CGAAGAACAC CAACAGATTA CCCAGGAAGT AGCCAGCCAG
TTAGCGATCG TCTTGTATCA GCAGCGGTTG GATGATCAGC TTGAAGAATA TACGGAACAG
CTTGAGCAGC GGGTCGACGA ACGAACCCAT GAAGTCAGGC AGTTATCGAC CGTGCAAGGG
GCTATTTTCG AACACGCCAG TCAGGCTATC CTGTCTACCG ATACCGATGG GGTTATCCAG
ACAGCTAACC AGGCCTGCGA AAAGTTGACG GGTTATCAGG TTGACGAATT AATTGGCCGG
GTGGCGCATT TCGAGTTTGG AGAGGCCGAT GGTCTAACGC CGATAGTAAA TTACCGAGCC
ACTCCGCCTG GCGAAGTGGT TTCGGACCCT CTGCTTAATA TGCTCGCGAA GCAGGGCTAT
TTTCAGACCG AATGTCGGAT TTGTCGTAAA GATGGAAGCT TGGTGCCAGT ACTAATGGCA
TCCAGTGTTC TGGCTGATGA AAACAACATA ACGATTGGGT ATGTGGGTAT CGCTACTGAT
ATCTCCGGAC TAAAAGCTAT TGAATCAAAG CTACAGGAAA AGAATCAAGA GTTAAATACA
ATCTTCGACG GGGCCATTGA CCTCCATTGC ATGGTTTCTG CTGATGGAAA ACTTCTGACC
GTCAATCGGG CGTGGGACAT AACCCTGGGG TATACTAAAG AAGAACTTGA TCAGCTGACG
TTTGCGGAGT TGGTACACCC GGACGAGCAG GAGCTTCTTC AGCAAAGTAT ATGGGAGCTG
ACGAATCATA AGCCCGTTCG AAGCCAGTTG AACCGATTTC TAAGAAAAGA TGGTACCTAT
CGGTCGTTGG AGTGGAATGC AATATGGGTT AATTCGATCT TTTACGTCTC GGCACGGGAT
GTTACAGAAC GCCAGCAGGC CGAAACGCAG TTAATTAATC TCAACCAGCG ACTTCAGGTA
GCTACAAAAG CGGCTGGACA GGGAATATGG GAGCGCGATT TTGAAAAAAA TACCCTGATC
TGGGACGACC GGCTGTGGGA AATGCACGGG TTACGTCCGG GTCGAACGGA TTGGAGCTAT
TCCGATTTTA CAAAGATTAT TCATCCCGAT GATCGGGAAA TCTTTCTGGA AGCTCCGCCA
ACTAATTTGA TCTCGAATGT AGTGGCGCGC ATTGTACTGC CCGACGATTC TGTACGCTAT
ATGGAAACCA ATGGAATCGT TATGACGGAT GACGCTGGGA AGCCCGTACG AGCAATCGGG
GTCGTTGCGG ATGTAACGGA GCGAAAAGTA GCTGAAGATG CCCTTCGGGA AAGTGAACGC
CGTTTCCGGG AAATAGCCGA AAATGTTGAC GAAATCTTCT GGATTCACTC GGCCGAACCG
TTCGAACTAT TGTATGTTAA CCCCGCCTAC GAGCGGGTGT GGAACGCCAG TTGCCAGAGT
TTATACGACG ATCCGTGGTC GTTTATGAAG GCCATTTTGG AGGAGGATAA ACCACTTATC
CTGGATTTCA TGAACCAATA CAAGGCGGGT TACGAAGGCC AGTTCTATTG TCGCCTGAAT
GGCGTGGATG GAAATCTCCG CTGGCTATCG ATCCGTACAT TCGTTGTACA TGACAGCTAT
GGTAAAATTG TCCGGCATAT TGGTATTGCC AACGATGTAA CAAGCCAGAA AGACAAGGAG
TCAGTGCTGC AACAATCGCT GCACCGGGAG CAGGAACTGA ATCAGCTCAA GTCTCAGTTT
GTGTCTACCG CTTCGCATGA GTTCCGAACG CCCCTGACAA CCATTCAGTC GAGTGTTGAT
TTAATAAAGT TTTACCTCAA GTTACCCACG GCCACGGCCA GTAAGTCTAT TCATCATCAT
TTAGATGTGA TCGGCAAGGA GATCGACCAG TTTGGAACCC TCCTCTCCAA TATTTTAACA
ATCGGTACCA TTGACGCCGG TAAAGTAAAA TTCAATCCTC AGCAGGCTGA TATCGTGGCT
GTCTGTACTG AAATCATCAG AACCCACTTC AGCGAGCAGG CCGACCATCG CACCGTCGAT
GTGTCAATAG AAGGCACGCC ATATATGGCT TTCATCGATC AAAAGTTGAT TAGCCATGTT
ATTGTCAACC TGCTGTCGAA CGCCTTCAAA TTTTCATCGG ACAATCCTGC CCTCCGACTT
CTCTTTAAGG AGAAAGCGGT TATTATTCAG GTAGTTGACA GGGGCGTAGG TATCCCGGCG
CGAGAAATGT CGGCCCTGTT TCAGGCCTTT TTTCGGGCCA GTAATTCGAA TGGAATTCCC
GGTACCGGCC TAGGCTTGGT TATTGCCCGG CAGTTTGTCG AACTTCACGG TGGTTATCTT
GACATTCGGA GTGAAGAGAA AAAGGGAACA GTTTGTACGG TTACCCTGCC CACAAGTCTT
CTCAACGACA CAATGGCTGC CTCACATACT AGTACACTTT CAAACGTAAC GGCTCATTAA
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| Protein sequence | MEEFSQFWFD VSLQGVAFVE PVYTGNPVVT TFQYKLVNNA FANILRRTRA DLTGQPVTGL
FQDEEDKSFV NRLLTSLQTG EPQQFHKHGR CAGEDVWFYT TVTRMDQQLM VNIQDVSEQK
KSECELQQRL AVESILTAVS GRMIILEAAD LDAYMTEALG QISTHIGAER AVVVLYSDDC
QRGSCAHEWC APGIEFRKQV NQNVPVNSFS WMYERLETGQ LVQFNGDEML LDAINSQSIF
KAMAVRSIIA IPLVQERKTQ GFIAFYTISQ PHQWRQSDIS LLQTFGTLII NLFGRLKQET
AIRRANQRLE GLHEIDQALL SSRLSDKPPL LIAMKYIHFM VPCERVTVFR IDEHTQLAVA
KSSLVDGVPV RNPRQVITES DFYERFLSSE AITYLPDLRQ ERTGMPPELS ASLIEEGFQS
FVIIPLFSRQ ECIGALTLAS ARPYFFTEEH QQITQEVASQ LAIVLYQQRL DDQLEEYTEQ
LEQRVDERTH EVRQLSTVQG AIFEHASQAI LSTDTDGVIQ TANQACEKLT GYQVDELIGR
VAHFEFGEAD GLTPIVNYRA TPPGEVVSDP LLNMLAKQGY FQTECRICRK DGSLVPVLMA
SSVLADENNI TIGYVGIATD ISGLKAIESK LQEKNQELNT IFDGAIDLHC MVSADGKLLT
VNRAWDITLG YTKEELDQLT FAELVHPDEQ ELLQQSIWEL TNHKPVRSQL NRFLRKDGTY
RSLEWNAIWV NSIFYVSARD VTERQQAETQ LINLNQRLQV ATKAAGQGIW ERDFEKNTLI
WDDRLWEMHG LRPGRTDWSY SDFTKIIHPD DREIFLEAPP TNLISNVVAR IVLPDDSVRY
METNGIVMTD DAGKPVRAIG VVADVTERKV AEDALRESER RFREIAENVD EIFWIHSAEP
FELLYVNPAY ERVWNASCQS LYDDPWSFMK AILEEDKPLI LDFMNQYKAG YEGQFYCRLN
GVDGNLRWLS IRTFVVHDSY GKIVRHIGIA NDVTSQKDKE SVLQQSLHRE QELNQLKSQF
VSTASHEFRT PLTTIQSSVD LIKFYLKLPT ATASKSIHHH LDVIGKEIDQ FGTLLSNILT
IGTIDAGKVK FNPQQADIVA VCTEIIRTHF SEQADHRTVD VSIEGTPYMA FIDQKLISHV
IVNLLSNAFK FSSDNPALRL LFKEKAVIIQ VVDRGVGIPA REMSALFQAF FRASNSNGIP
GTGLGLVIAR QFVELHGGYL DIRSEEKKGT VCTVTLPTSL LNDTMAASHT STLSNVTAH
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