| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1008 |
|---|
| Symbol | |
|---|
| ID | 8724738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1223492 |
|---|
| End bp | 1225102 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003385858 |
|---|
| Protein GI | 284035928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.69554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCA CGCAACAATC TGTCACCCTC AGCTTTATTG GCAATGAGCC GGTAACCGGC
GACGGCATTT TTTTCAAAGC CTTCGCGCCT TCCCTTAGCG AGAATCTTGC CGATGACTTT
GCAAACGTAT CTCAAGAGCA GGCCAATCAG GCCATCGAAA AAGCTGCCGA AGCCTTTCCG
GTATATGCCA AACTCAGTGG GGCACAACGG GCCGACTTCC TCGACGCCAT TGCCGCCGAA
ATAGAAGCCA TTGGCGACGA ACTCATTGAA CGGGCTGTGC TGGAAAGCGG ACTGCCGACC
GGTCGTATTT CGGGTGAGCG GGGCCGTACC ACGGGTCAGT TACGGATGTT CGCGAATGTC
CTTCGTGAAG GTTCATGGGT GGATGCCCGC ATCAATCCGG CTATGCCTGA CCGCCAACCC
CTACCCCGCC CCGACTTGCG CCGTATGCTG GTGCCCCTGG GACCGGTTGT CGTTTTTGGA
GCCAGCAATT TCCCGCTTGC CTTCTCGGTA GCCGGTGGCG ACACGGCGTC GGCACTGGCT
GCTGGTTGCC CGGTTGTTGT GAAAGCGCAT CCCTCGCATC CGGGTACCTC GTCGCTGGTG
GGTCAGGCGA TTGTATCGGC TGCTCAGAAA ACCGGTATGC CCGATGGCGT TTTTTCGCTC
TTACATGCCG ATATTGAGGT TGCTCAACAA CTCGTCGCCC ATCCGGCTGT GAAAGCAGTT
GGCTTTACCG GATCGCGAGC CGGTGGCCTG GCGCTGTTGC GCGTAGCCCA GAGTCGCCCA
GAGCCGATTC CGGTCTATGC TGAAATGAGC GCCGTGAATC CCTTTGTTGT GTTACCGGGT
GCCATCAGTC AGGAGACAGG ACCTAATTCT GCCACTACGG TTGCCGCCGG GCTGGCGGGT
TCGATCACCC TGGGCGTAGG CCAGTTCTGC ACCAATCCAG GCTTAGTATT CTTACTCGAC
TCCCCCAAAA CACAGGTATT TCTGGAAACA GTAGCCGAGA AAATTCGGGC GTCGGCACCG
GCAACGATGT TGAACGCAGG CATCTGTCAG GCGTATCAAA AGGGCGTTCA GCAGAACCGG
ATTATTCCCG GCGTTCATGT GCTGGCCGAA GCCGACACGG ACGCTGAAAG CAGCCAGACA
CAGGGACGAC CAACGATACT GAGTACCACA GCCCCTATTT TCCTGAGCAG CCCGGCGCTG
GGCGAAGAGG TTTTCGGACC AACATCATTG GTTGTTGTGT GTGAGACCGA AGCCGAGCTG
GAAGAATGCC TAACCACTTT GGAAGGTCAA CTTACGGCAA CCATTTACGC TACACCGGCC
GAGCTGACAT TCTCGTCTGT CGATTGGGTT TCTTTACTTC AGGCGAAAGC TGGACGGGTC
TTGTTTGGCG GCTACCCAAC GGGTGTTGAA GTTTCGGAAG CGATGACCCA CGGCGGTCCT
TTCCCAGCCA CCAGCGATAG CCGGTCGACG TCGGTAGGAA CAGCGGCTAT ACTACGGTTC
GTGCGGCCTG TCACGTATCA GAGCTTCCCG GATGAGTTGT TACCACCCGC TTTACAAAAC
GATAACCCGC TCAATATCTG GCGTAATGTA GATGGAAAGA TCTCCAAGTA A
|
|---|
| Protein sequence | MSTTQQSVTL SFIGNEPVTG DGIFFKAFAP SLSENLADDF ANVSQEQANQ AIEKAAEAFP
VYAKLSGAQR ADFLDAIAAE IEAIGDELIE RAVLESGLPT GRISGERGRT TGQLRMFANV
LREGSWVDAR INPAMPDRQP LPRPDLRRML VPLGPVVVFG ASNFPLAFSV AGGDTASALA
AGCPVVVKAH PSHPGTSSLV GQAIVSAAQK TGMPDGVFSL LHADIEVAQQ LVAHPAVKAV
GFTGSRAGGL ALLRVAQSRP EPIPVYAEMS AVNPFVVLPG AISQETGPNS ATTVAAGLAG
SITLGVGQFC TNPGLVFLLD SPKTQVFLET VAEKIRASAP ATMLNAGICQ AYQKGVQQNR
IIPGVHVLAE ADTDAESSQT QGRPTILSTT APIFLSSPAL GEEVFGPTSL VVVCETEAEL
EECLTTLEGQ LTATIYATPA ELTFSSVDWV SLLQAKAGRV LFGGYPTGVE VSEAMTHGGP
FPATSDSRST SVGTAAILRF VRPVTYQSFP DELLPPALQN DNPLNIWRNV DGKISK
|
|---|
| |