Gene Slin_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0980 
Symbol 
ID8724710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1194103 
End bp1194930 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content51% 
IMG OID 
Productpeptidase M48 Ste24p 
Protein accessionYP_003385830 
Protein GI284035900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.269244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.374178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG TCATAATTGC CATGTTGTCA ATCGCTTTTG CCGTAACGGC CTGCGAGAAA 
GTGCCCCTGA CTGGACGCAA GCAATTAATC CTGGTGCCGA ATAATGATAT GCTATCCATG
AGTTTTACTC AGTACAAAGC ATTTCTGGAT ACCAGTCGGG TCGTCCCTAC ATCAAGCGGA
GACGCTGAGA TGGTGAGTCG AGTTGGTAAC CGCATCCGCC AGGCTGTTGA AAGTTACATG
AATAGTAATG GCTATGCCAA GCGGCTTGAA GGGTTCCAGT GGGAGTATCA TCTGGTTCAG
AGTAATCAGG TAAATGCCTG GTGTATGCCA GGGGGTAAAA TTGTTGTTTA CTCGGGTATT
CTTCCATACA CCAAAAACGA AGCCGGTTTG GCAACAGTAT TAGGCCATGA GGTATCACAC
GCCATTGCTG AGCATGGTAA CGAACGCATG AGTGAAGGGC TGGTGGCAAA CGGATTGCTA
CAGGCGGGTC AGGTAGCCAC GGGTATTGGC ACATCCGGGA AAAGTGCCCA AACACAGGCT
ATCTTCCAGC AGGCGTTTGG TGTTGTTGGC CCATTAGCTT ATCAATACGG CGTTGGTCTG
CCTCACAGCC GTAAGCAGGA GTCAGAAGCC GATCACCTGG GGCTGATTTT TATGTCGATG
GCGGGCTACG ATCCAAACGA GGCCATTACG TTCTGGCAGC GCATGGCTCA GGCAAGTGGT
GGCAAAGCAC CTGCCGAATT CCTGTCAGAT CACCCATCGG ATGAACGTCG GATTGCCGAC
TTGAAAAAAC TGCTTCCCGA CGCGCAAAAG TATTACGCCC GGCGGTAG
 
Protein sequence
MRKVIIAMLS IAFAVTACEK VPLTGRKQLI LVPNNDMLSM SFTQYKAFLD TSRVVPTSSG 
DAEMVSRVGN RIRQAVESYM NSNGYAKRLE GFQWEYHLVQ SNQVNAWCMP GGKIVVYSGI
LPYTKNEAGL ATVLGHEVSH AIAEHGNERM SEGLVANGLL QAGQVATGIG TSGKSAQTQA
IFQQAFGVVG PLAYQYGVGL PHSRKQESEA DHLGLIFMSM AGYDPNEAIT FWQRMAQASG
GKAPAEFLSD HPSDERRIAD LKKLLPDAQK YYARR