Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0980 |
Symbol | |
ID | 8724710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1194103 |
End bp | 1194930 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | peptidase M48 Ste24p |
Protein accession | YP_003385830 |
Protein GI | 284035900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.269244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.374178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG TCATAATTGC CATGTTGTCA ATCGCTTTTG CCGTAACGGC CTGCGAGAAA GTGCCCCTGA CTGGACGCAA GCAATTAATC CTGGTGCCGA ATAATGATAT GCTATCCATG AGTTTTACTC AGTACAAAGC ATTTCTGGAT ACCAGTCGGG TCGTCCCTAC ATCAAGCGGA GACGCTGAGA TGGTGAGTCG AGTTGGTAAC CGCATCCGCC AGGCTGTTGA AAGTTACATG AATAGTAATG GCTATGCCAA GCGGCTTGAA GGGTTCCAGT GGGAGTATCA TCTGGTTCAG AGTAATCAGG TAAATGCCTG GTGTATGCCA GGGGGTAAAA TTGTTGTTTA CTCGGGTATT CTTCCATACA CCAAAAACGA AGCCGGTTTG GCAACAGTAT TAGGCCATGA GGTATCACAC GCCATTGCTG AGCATGGTAA CGAACGCATG AGTGAAGGGC TGGTGGCAAA CGGATTGCTA CAGGCGGGTC AGGTAGCCAC GGGTATTGGC ACATCCGGGA AAAGTGCCCA AACACAGGCT ATCTTCCAGC AGGCGTTTGG TGTTGTTGGC CCATTAGCTT ATCAATACGG CGTTGGTCTG CCTCACAGCC GTAAGCAGGA GTCAGAAGCC GATCACCTGG GGCTGATTTT TATGTCGATG GCGGGCTACG ATCCAAACGA GGCCATTACG TTCTGGCAGC GCATGGCTCA GGCAAGTGGT GGCAAAGCAC CTGCCGAATT CCTGTCAGAT CACCCATCGG ATGAACGTCG GATTGCCGAC TTGAAAAAAC TGCTTCCCGA CGCGCAAAAG TATTACGCCC GGCGGTAG
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Protein sequence | MRKVIIAMLS IAFAVTACEK VPLTGRKQLI LVPNNDMLSM SFTQYKAFLD TSRVVPTSSG DAEMVSRVGN RIRQAVESYM NSNGYAKRLE GFQWEYHLVQ SNQVNAWCMP GGKIVVYSGI LPYTKNEAGL ATVLGHEVSH AIAEHGNERM SEGLVANGLL QAGQVATGIG TSGKSAQTQA IFQQAFGVVG PLAYQYGVGL PHSRKQESEA DHLGLIFMSM AGYDPNEAIT FWQRMAQASG GKAPAEFLSD HPSDERRIAD LKKLLPDAQK YYARR
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