Gene Slin_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0979 
Symbol 
ID8724709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1193265 
End bp1193903 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003385829 
Protein GI284035899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.202477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.468073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAT TTACCCGCTT TATGTCTATG AAAATTATCT GCGTTGGCCG TAATTACGTC 
GAACACATAA AGGAGCTTAA TAATGAACAG CCCGACGACC CGGTCATTTT CATGAAGCCC
GAAACGGCTA TTCCCTTAAA ACATGAACCT TTCTTTTACC CGGATTTTTC CAGCGATGTT
CACCATGAAG TAGAGATTCT GGTAAAAATC AACCGGGTAG GCAAGAATAT CGATGAGAAG
TTTGCGCATA AATACTACGA CGAAATCGGC GTTGGGGTCG ATTTTACGGC TCGTGATCTA
CAGAGTAAAC TAAAGGCGAA AGGGCTGCCC TGGGAACTGG CAAAAGGCTT TAATGGCTCA
GCGCCGATTT CGGGCTTTGT CCCAAAAACA GATTTTGCAG ATCTACAAAA CCTGAACTTC
CGGCTAGATG TTAATGGTGA AACCCGGCAA CTGGGCAACA CAAGCCTGAT GCTCTTTAAG
ATTGACTACC TGATTTCGTT TGTATCGCGC TACTTTCTGC TCCAGCAAGG CGATATTTTG
TTTACAGGAA CACCCAAAGG CGTTGGTCCT GTAAACGTTG GCGACCAGCT AACGGCCTTC
ATCGAAGACA AGCCAATGCT GACATTTGAT GTAAAATGA
 
Protein sequence
MAGFTRFMSM KIICVGRNYV EHIKELNNEQ PDDPVIFMKP ETAIPLKHEP FFYPDFSSDV 
HHEVEILVKI NRVGKNIDEK FAHKYYDEIG VGVDFTARDL QSKLKAKGLP WELAKGFNGS
APISGFVPKT DFADLQNLNF RLDVNGETRQ LGNTSLMLFK IDYLISFVSR YFLLQQGDIL
FTGTPKGVGP VNVGDQLTAF IEDKPMLTFD VK