Gene Slin_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0897 
Symbol 
ID8724627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1072452 
End bp1073816 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content48% 
IMG OID 
ProductRadical SAM domain protein 
Protein accessionYP_003385750 
Protein GI284035820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA AACGCTCCCA TTACATCGTT GCAACGGATA CAATAGCAGG CCTCATTCCC 
AAACGAGTAC TGCTGGCCAC ACGTACCGCC CGCGTACTAG TCATCAACGA AGCACTCTAC
CAAAAACTTG AGCGCGAGTC CTGGGATGAG ATGCACGACA ATGATTTTGA CAAGTTACGT
CAAATAGAAG CCATTGTGCC TGCTTCAGAA TATGAACTCC AGTTGATTAT TGACCGGAAT
AAGGCTGCGG TAGCCGATAG CCGAACACTC TATCACGTCA TTCAGCCAAC GGCTATGTGT
CAGCTTGGGT GTGGCTACTG CGGTCAACGG CACACCAAGG ACTATATTGG TGGCAACGCA
GCCGAGCGGA TTCTGGAACG TATCGAGAGT AAGTTCACCC TCAAGCCCTA TAACCACGTT
GAGATTGCCT GGTTTGGCGG GGAGCCACTT ATGGCGTACG CGCAAATTCG TGAATTGACC
CCAAAAATTC AGGATATGGC CACCCGGCAC GGCTGTACGT ACAGTGCCAA GCTGGTTACG
AATGGGCTGA GTCTGAAGGA ACCGGTTTTT CTGGAACTTG TCCGAAAGTA CGGCATCAAG
ACTATGGAGG TTACTCTCGA CGGTACAGCC GAGTACCACG ATGCTCGTCG GCACACCAAG
GAGGGATTGT CAACATTCAA TCTGATTTTT CAGAACCTCG TCAAAATTTA TAATCGTCCT
GACTTTAAGG ACCTGGGCTG TTCCATTTCA ATTCGCTGTA ATGTAGATGA GCGCAATAAC
GAAAGTGTGG TGCCCCTGAT CCGGTTATTA GCTGACTACA ATCTACAGAA CAAAATTTCT
TATTTCTACG TGGCTCCGAT CCACTCCTGG GGCAACGATG CTCATAAACT CTCGCTCGAA
AAGCAAACCT TTGCCGATCA AGAGATTGAT TGGCTCATCG AGCAGTTTAA ACAGGGTTTT
TCGCCGGGAC TCGTACCTAA ATTAAATCCG GAGGTCTGCC TATCAGTCAC GCCAGATTCC
GAAGTGTTCG ATGCATTTGG CAATGTATTC GACTGCACTG AGGTGCCCTA TGTGGAGGCT
TATGAAAATA CCCAATACTT AATTGGTAAC GTCAATAACG GGTTGGAGTC GCTGTCGTCG
CACCGGGAGT TATTAAGCTT CAACGACGAA ATCCTGGCAG GTAAATACTC ATGTTCAAGC
TGCCCTATGC TACCCGTTTG CGGAGGAGGT TGTCCTAAAT CGTGGCGTGA GAACATAGCC
GCCTGCCCAA CCAACAAGTT CAATATCAAG GATAAACTGC TCATGCATTA CGCAAGGCGG
AAGAATGGTA AAGAGGAGTT TATTGCCCTG TCGGCCAAAT CATAA
 
Protein sequence
MNFKRSHYIV ATDTIAGLIP KRVLLATRTA RVLVINEALY QKLERESWDE MHDNDFDKLR 
QIEAIVPASE YELQLIIDRN KAAVADSRTL YHVIQPTAMC QLGCGYCGQR HTKDYIGGNA
AERILERIES KFTLKPYNHV EIAWFGGEPL MAYAQIRELT PKIQDMATRH GCTYSAKLVT
NGLSLKEPVF LELVRKYGIK TMEVTLDGTA EYHDARRHTK EGLSTFNLIF QNLVKIYNRP
DFKDLGCSIS IRCNVDERNN ESVVPLIRLL ADYNLQNKIS YFYVAPIHSW GNDAHKLSLE
KQTFADQEID WLIEQFKQGF SPGLVPKLNP EVCLSVTPDS EVFDAFGNVF DCTEVPYVEA
YENTQYLIGN VNNGLESLSS HRELLSFNDE ILAGKYSCSS CPMLPVCGGG CPKSWRENIA
ACPTNKFNIK DKLLMHYARR KNGKEEFIAL SAKS