| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0821 |
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| Symbol | |
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| ID | 8724552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 995878 |
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| End bp | 999066 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003385682 |
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| Protein GI | 284035752 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.847415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAT TGTTCATCGA ACGCCCGGTA CTGGCCACGG TCATTTCGAC CCTGCTGGTT
ATTCTGGGCG TCATCTCCCT GCTGTCGCTC CCTGTCACGC AGTTTCCCGA AATCGCTCCC
CCCAGCGTGC AAGTGGCCGC ATCGTACCCT GGTGCCAACG CCGACGTGGT GGCCCGTTCC
GTCGCTACGC CCCTCGAAGA GGCCATCAAC GGGGTCGAGA ATATGACGTA CATGACCTCC
TCGTCGGGTA ATGACGGGTC GGTGGCGATC AACATTTATT TCAAGCTGGG CACCAACCCC
GATCTGGCGG CTGTGAACGT ACAGAACCGG GTGGCCAAAG CCACGAGCCT GCTGCCGGCC
GAAGTAATTC AGGCCGGCAT TTCGACGCAG AAGCAGCAGA ACAGCATGAT CATGATCCTC
AACCTGAACA GCAACGAAGA GGCTTACGAC GAAACGTTTT TGCAGAACTA CGCCAAAATA
AACCTGATTC CGGAGTTGCA GCGGGTCAAC GGCGTAGGAC AGGTGATGGT CTTTGGCGTG
AAGGATTATT CGATGCGGGT CTGGCTCAAA CCGGACCGGT TGGTCGCGCT TGGTTTATCG
CCCCAGGAAG TACTAAGTGC CATTCGGGAG CAGAATCTGG AAGCGGCACC GGGTAAAATT
GGGGAGAACA GCCGGGAAGC CTTCGAGTAT GTGATTAAGT ACAAGGGAAA ACTCAACCAG
CCGGAGCAGT ACGAAAACAT CATCCTGAAA GCGAATACCG ATGGCTCGCT CATTCAACTC
AAGGATGTCG CGCGGATTGA ATTTGGCTCC TTCACCTACA GTGGCGACAC CCGCGTGAAT
GGCAAGCCCA GCGTCGGCAT TGCGATTAAC CAGATGGCAG GCTCGAACGC CAACGACATT
CAGGTAGCGA TTCTGTCCAT TATGGACAAA GCCGCCGGAG CCTTTCCCAA AGGCATAAAC
TATACCATCG GCTACAGCAC CAAAACGTTC CTTGATGAAT CCATCGATCA GGTAACGCAC
ACGCTGATCG AAGCCTTTAT CCTGGTATTT ATTGTCGTAT TTCTGTTTCT ACAGGACTTT
CGCTCCACGC TTATTCCGGC CATTGCGGTG CCCGTTGCCA TTGTCGGTAC GTTCTTTTTC
ATGCAGTTGT TTGGCTTTAC GATCAACTTG CTGACGCTTT TTGCGCTGGT ACTGGCCATC
GGTATCGTGG TCGATGATGC GATTGTGGTG GTCGAAGCCG TTCACGCCAA GATGGAAAAA
AGCCGACAGT CGGCGCGGTC GGCAACGATC CAATCCATGC AGGAAATTTC AGGAGCTATC
ATTTCCATTA CACTGGTGAT GGCGGCTGTA TTCGTGCCGG TCGGGTTCAT GAATGGGCCG
GCGGGGGTTT TCTATCAGCA GTTCGCCTTC ACGCTGGCTA TCGCCATTCT GATTTCAGCG
GTAAACGCGC TCACGCTGAG TCCGGCGCTC TGTGCACTAC TTTTAAAAAA CCCGCATGGC
GACGACGACC ACGTTTACGC AAAAAAAGGC TTCCTGACTC GCTTCTTCGA CGCCTTCAAC
GCGGGCTTTA CCTCCCTGAC CAGCAAGTAT GTCAGGAGCC TTCGGTTTCT AATCCGCAAC
AAATGGGTCG GTCTGAGCGG ACTGACGTTG GTAACGGCCG TCACGGTTTT TCTGATGCGG
ACCACACCAA CGGGTTTTAT TCCCTCGGAG GATCAGGGGT TTATCGCCTA CTCGCTGAAA
CTTCCGGCGG GATCATCGTT GCAGCGAACT CAGAAAGTAG CCGACAAAAT TGAAGGCATT
CTGCACAAAA CGCCCGCCGT CGAGCAGCAT ATCGAAATCA GTGGGTTCAA CATGATTGCC
AACTCCGCCA GCCCATCCTA TGCCGCCGGG TTCGTTAAAA TGAAGCCCTA CGAAGACCGG
GGAGCCGTCA AGGACCTTCA GCAGGTGGTC GATTCGGTGA GCAAGCAGGT GGCGGGGGTC
GAAGAGGGGC GGGTCGATGT ATTTACCATG CCGACGGTTC CGGGATTCAG CAACGTCGAT
GGCTTTGAGT TGTTGCTACA GGATCGGACC GGCGGCAAAC TCGATAAGCT CAGTGCCACG
GCCAACGCCT TTATCGAGGA ACTACAAAAG CGTCCCGAAA TCGCGGCTGC CTTCACAACG
TTCGATACGG GCACGCCCCA GTTTGAGCTG GAACTGGACG TAAAGAAAGC AAAACAACTC
GGCGTTTCGA CCAGCGATAT TCTGCAAACG ATGCAGGTGT ATTACGGCAG CACGTTTGCC
TCGGACTTCA ACCGGTTCGG TAAATTCTAC CGCGTCATTG CGCAGGCGGA TGCCGCGTAT
CGGGCTGACC CATCGTCGCT GAACAGTATT TACGTGAAGA ACGCCACCGG ACAAATGGTG
CCGATGACGA CATTCGTTAC CTTGAAGCGC GTCTATGGAC CGGAAGCCAT CACCCGGAAT
AATCTGTTTA CCTCGGTCGC CATCAACGGA CAGGCCAAGC CGGGGTACAG CACGGGGGAT
GCCATCCGGG CGGTGGAAGA AGTGGCAAAG CAAAGCCTGC CCGTGGGCTA CACCTACGAA
TGGACGGGCA TGACGCGCGA AGAAATCGCG GCTGGTAGTC AGTCGAGTCT TATTTTTGGG
CTCAGTCTGG TGTTTGTTTA TTTCCTGCTG GCGGCTCAGT ACGAAAGTTA CGTACTGCCG
TGGGCGGTGT TATTGTCCAT TCCAACCGGG ATTCTGGGCG TTTTCGGGTT TATCAATCTG
GCAGGCATCG ACAACAATAT TTACGTCCAG GTGGGTTTGA TCATGCTGAT CGGGTTGCTG
GCCAAAAATG CCATTCTGAT TGTCGAATTT GCTATCCAGC GACGGCAGGC GGGTATGGGT
TTAGTGGCGT CGGCACTAGA CGCGGCCAAA CTGCGGCTTC GCCCGATTCT GATGACCTCG
TTTGCGTTCA TTGTTGGTCT GGTACCGTTG ATGAGTGCCA CGGGAGCATC GGCCAAAGGA
AACCATTCGA TCAGTATCGG GACAGCGGGC GGTATGCTAA CCGGCGTACT GCTGGGTCTG
TTTATCATTC CCGTGCTGTT CGTCATTTTT CAGGGAATTC AGGAAAAAAT CATTCGGCCC
AAAACCGCCG AAGAACGGAA AGCGCTGGCC GAAGAGGCCT TTGCCAACAA TCCGCTAACC
CGTAATTAA
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| Protein sequence | MFKLFIERPV LATVISTLLV ILGVISLLSL PVTQFPEIAP PSVQVAASYP GANADVVARS
VATPLEEAIN GVENMTYMTS SSGNDGSVAI NIYFKLGTNP DLAAVNVQNR VAKATSLLPA
EVIQAGISTQ KQQNSMIMIL NLNSNEEAYD ETFLQNYAKI NLIPELQRVN GVGQVMVFGV
KDYSMRVWLK PDRLVALGLS PQEVLSAIRE QNLEAAPGKI GENSREAFEY VIKYKGKLNQ
PEQYENIILK ANTDGSLIQL KDVARIEFGS FTYSGDTRVN GKPSVGIAIN QMAGSNANDI
QVAILSIMDK AAGAFPKGIN YTIGYSTKTF LDESIDQVTH TLIEAFILVF IVVFLFLQDF
RSTLIPAIAV PVAIVGTFFF MQLFGFTINL LTLFALVLAI GIVVDDAIVV VEAVHAKMEK
SRQSARSATI QSMQEISGAI ISITLVMAAV FVPVGFMNGP AGVFYQQFAF TLAIAILISA
VNALTLSPAL CALLLKNPHG DDDHVYAKKG FLTRFFDAFN AGFTSLTSKY VRSLRFLIRN
KWVGLSGLTL VTAVTVFLMR TTPTGFIPSE DQGFIAYSLK LPAGSSLQRT QKVADKIEGI
LHKTPAVEQH IEISGFNMIA NSASPSYAAG FVKMKPYEDR GAVKDLQQVV DSVSKQVAGV
EEGRVDVFTM PTVPGFSNVD GFELLLQDRT GGKLDKLSAT ANAFIEELQK RPEIAAAFTT
FDTGTPQFEL ELDVKKAKQL GVSTSDILQT MQVYYGSTFA SDFNRFGKFY RVIAQADAAY
RADPSSLNSI YVKNATGQMV PMTTFVTLKR VYGPEAITRN NLFTSVAING QAKPGYSTGD
AIRAVEEVAK QSLPVGYTYE WTGMTREEIA AGSQSSLIFG LSLVFVYFLL AAQYESYVLP
WAVLLSIPTG ILGVFGFINL AGIDNNIYVQ VGLIMLIGLL AKNAILIVEF AIQRRQAGMG
LVASALDAAK LRLRPILMTS FAFIVGLVPL MSATGASAKG NHSISIGTAG GMLTGVLLGL
FIIPVLFVIF QGIQEKIIRP KTAEERKALA EEAFANNPLT RN
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