Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0810 |
Symbol | |
ID | 8724541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 984121 |
End bp | 985182 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Agmatine deiminase |
Protein accession | YP_003385672 |
Protein GI | 284035742 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.360404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCA TTCCCGCCCG TGAGGGCTTT TTCTTTCCCG CCGAATGGCA TCCGCACGTA GCCACCTGGC TTAGCTGGCC CCATACCGAA GCTTCCTGGA CCAAAGAGCG GCAGGAGCTG ATGTTCCCCG CCTATATCGA TTTTATCAAA GCCATTGCCG AAAGTGAGCA GGTGTGCATC AATGCCCACA ATGATATTGT CATTCAGGCA GCCAAACTAC GGCTGTTAGC GGCCGGTGCC GATATGAGCC GTATCACGCT CCTACCCCAC TCCACCAACG ATTCGTGGTG CCGCGACCAC GGCCCGGCTT TTCTGATCAA TCCGGAAAAG AACGAACGGA TGATCGTCAA CTGGGGCTAT AATGCCTGGG GCGGCAAATA TCCTCCTTAT GACCGAGACG ACCTGATTCC GGTGGAAATT GCGCATTACC GGGGATTGGA GTATGTTACA CCCGGCATTA TTATGGAGGG CGGATCGGTG GAGTTTAATG GAGCGGGCAC GGTATTGACC AGCCGCGCCT GTTTGTTAAA CCAAAACCGG AACGCCCATC TGACACAGGA AAAGATTGAG CAATACCTCT GCGATTATTA CGGCGTACAG CAGGTACTTT GGGTAGAGGA AGGCATCGTT GGCGACGATA CCGATGGGCA CATCGATGAT ACAGTTCGGT TTGTGAACGA AGACACCGTC GTTGCCGCCT ATGAGCCGAA TAAAAACGAC GCGAACTACC CATTCCTTCA GGAAATCCAC CACGAACTCA AGCAGATGCG CTTGCTGAAC GGCAAGCAAC TGAACATCGT CGAGCTACCA ATGCCAGACC CGGTTGAGAG CGATGGACTG CGGCTTCCGG CCTCCTACGC CAATTTCCTG ATCACGAACG GAGCCGTCAT CGTACCTACG TTCCGGTGTG ACAAGGATCA GCAGGCACTG GACATTATCG ACACATGCTT CCCAGACCGT AAAATCATCG GCATCGACTC AACAGACATC GTTTGGGGCC TGGGTAGTTT CCATTGCCTA AGCCAACAGG AGCCTCTGAC CGGGATTTCT ACTGGATTTT AA
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Protein sequence | MSRIPAREGF FFPAEWHPHV ATWLSWPHTE ASWTKERQEL MFPAYIDFIK AIAESEQVCI NAHNDIVIQA AKLRLLAAGA DMSRITLLPH STNDSWCRDH GPAFLINPEK NERMIVNWGY NAWGGKYPPY DRDDLIPVEI AHYRGLEYVT PGIIMEGGSV EFNGAGTVLT SRACLLNQNR NAHLTQEKIE QYLCDYYGVQ QVLWVEEGIV GDDTDGHIDD TVRFVNEDTV VAAYEPNKND ANYPFLQEIH HELKQMRLLN GKQLNIVELP MPDPVESDGL RLPASYANFL ITNGAVIVPT FRCDKDQQAL DIIDTCFPDR KIIGIDSTDI VWGLGSFHCL SQQEPLTGIS TGF
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