Gene Slin_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0810 
Symbol 
ID8724541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp984121 
End bp985182 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID 
ProductAgmatine deiminase 
Protein accessionYP_003385672 
Protein GI284035742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.360404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA TTCCCGCCCG TGAGGGCTTT TTCTTTCCCG CCGAATGGCA TCCGCACGTA 
GCCACCTGGC TTAGCTGGCC CCATACCGAA GCTTCCTGGA CCAAAGAGCG GCAGGAGCTG
ATGTTCCCCG CCTATATCGA TTTTATCAAA GCCATTGCCG AAAGTGAGCA GGTGTGCATC
AATGCCCACA ATGATATTGT CATTCAGGCA GCCAAACTAC GGCTGTTAGC GGCCGGTGCC
GATATGAGCC GTATCACGCT CCTACCCCAC TCCACCAACG ATTCGTGGTG CCGCGACCAC
GGCCCGGCTT TTCTGATCAA TCCGGAAAAG AACGAACGGA TGATCGTCAA CTGGGGCTAT
AATGCCTGGG GCGGCAAATA TCCTCCTTAT GACCGAGACG ACCTGATTCC GGTGGAAATT
GCGCATTACC GGGGATTGGA GTATGTTACA CCCGGCATTA TTATGGAGGG CGGATCGGTG
GAGTTTAATG GAGCGGGCAC GGTATTGACC AGCCGCGCCT GTTTGTTAAA CCAAAACCGG
AACGCCCATC TGACACAGGA AAAGATTGAG CAATACCTCT GCGATTATTA CGGCGTACAG
CAGGTACTTT GGGTAGAGGA AGGCATCGTT GGCGACGATA CCGATGGGCA CATCGATGAT
ACAGTTCGGT TTGTGAACGA AGACACCGTC GTTGCCGCCT ATGAGCCGAA TAAAAACGAC
GCGAACTACC CATTCCTTCA GGAAATCCAC CACGAACTCA AGCAGATGCG CTTGCTGAAC
GGCAAGCAAC TGAACATCGT CGAGCTACCA ATGCCAGACC CGGTTGAGAG CGATGGACTG
CGGCTTCCGG CCTCCTACGC CAATTTCCTG ATCACGAACG GAGCCGTCAT CGTACCTACG
TTCCGGTGTG ACAAGGATCA GCAGGCACTG GACATTATCG ACACATGCTT CCCAGACCGT
AAAATCATCG GCATCGACTC AACAGACATC GTTTGGGGCC TGGGTAGTTT CCATTGCCTA
AGCCAACAGG AGCCTCTGAC CGGGATTTCT ACTGGATTTT AA
 
Protein sequence
MSRIPAREGF FFPAEWHPHV ATWLSWPHTE ASWTKERQEL MFPAYIDFIK AIAESEQVCI 
NAHNDIVIQA AKLRLLAAGA DMSRITLLPH STNDSWCRDH GPAFLINPEK NERMIVNWGY
NAWGGKYPPY DRDDLIPVEI AHYRGLEYVT PGIIMEGGSV EFNGAGTVLT SRACLLNQNR
NAHLTQEKIE QYLCDYYGVQ QVLWVEEGIV GDDTDGHIDD TVRFVNEDTV VAAYEPNKND
ANYPFLQEIH HELKQMRLLN GKQLNIVELP MPDPVESDGL RLPASYANFL ITNGAVIVPT
FRCDKDQQAL DIIDTCFPDR KIIGIDSTDI VWGLGSFHCL SQQEPLTGIS TGF