| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0804 |
|---|
| Symbol | |
|---|
| ID | 8724535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 976866 |
|---|
| End bp | 977693 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_003385666 |
|---|
| Protein GI | 284035736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.808367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.36802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAC TTACATTCCT GCTTTTTAGT CTTATCTCGT TCTGTTCCTT CGGACAAACG
ACCGACACCC TTGTTTATAA CGCAAAACGG GCTGTTCCGC TCGAAGGAGC CAGTAACTTC
CGCGACCTGG GCGGCTATCC AACCAAAAAT GGTCGTCGGG TAAAATGGGG GCATCTGTAT
CGCTCGGCTG ATATTAGCAA ACTGACCGAT GCCGACTTAC AGGTTCTGGC TGATCTTCAC
ATTACGGCTG TTTGCGACCT GCGCGGCCCG GATGAAATTA AGACTAACCC AGACCGGCTA
CCAGCCGGAG CAACCTGGTA CAATATGCCG GCCGGGAGCG AAAATACCAG CGCCACAACG
GCGGCTTTGA TGGGGGCCAA GCCCGCTAAC CGGGATTCGA TGATGATGGT CTTTTATGGC
CGTACAGATC ACCTCAAAGC AAAATACAAG CCGATGTTCG ACCAATTGCT GGCCCTCAAT
AACGATAAAG CGTTACTTTT TCATTGCACC GCTGGTAAAG ATCGGACAGG TATCGGTGCG
GCTCTGATTC TATCAGCGTT GGGCGTTGAC CGGGCAATAA TTCTGAAAGA TTACGCAGCC
ACTAATGAGT ACTGGAAAGG TAACAGAGAG CAGCTTGTGC AGGCTATGGC CAAACAGGGA
ATGGACGAAA AGACCGTAAA AAGTATGCTG GCCGCAAACC CATCGTATTT ACAAACTACA
TTCGACACCA TTGATCGGCA ATACGGTTCG ATGGATAAAT TCTTGGCTAA GGAACTGGAG
TTGACACCTA AAAAACTGGC ATTGCTCCGG GCGAAATATA TTCAATAG
|
|---|
| Protein sequence | MQKLTFLLFS LISFCSFGQT TDTLVYNAKR AVPLEGASNF RDLGGYPTKN GRRVKWGHLY
RSADISKLTD ADLQVLADLH ITAVCDLRGP DEIKTNPDRL PAGATWYNMP AGSENTSATT
AALMGAKPAN RDSMMMVFYG RTDHLKAKYK PMFDQLLALN NDKALLFHCT AGKDRTGIGA
ALILSALGVD RAIILKDYAA TNEYWKGNRE QLVQAMAKQG MDEKTVKSML AANPSYLQTT
FDTIDRQYGS MDKFLAKELE LTPKKLALLR AKYIQ
|
|---|
| |