Gene Slin_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0790 
Symbol 
ID8724520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp956010 
End bp956939 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_003385652 
Protein GI284035722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.604563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTT ACCAAGGCCT CGATGACATT CAACCCCTAC CGAATGCCGT TGTAACAAGT 
GGTACATTTG ATGGAGTACA CCGGGGTCAC CAGATTATTT TGTCGCGGCT GACGGAGGTT
GCGCAGGCAA GTGGGGGCGA GTCGGTCTTA ATTACATATT GGCCGCATCC GCGTACCGTT
GTGTCAAACG ACAGCCAGAA TCTGAAGCTG TTGACAACAC TGGAGGAAAA AATCGAACTC
CTTGATCAGG CGGGTGTTGA GCACCTCGTT GTTATTCCCT TCACACGCTC GTTCTCCGAA
CTAACCTCCG AAGAGTACAT CCGGCAGATT CTGCTTGATA AGATAGGGAC CAAGAAGCTG
GTCATTGGCT ACGACCATCG GTTTGGCCGC GACCGCGAAG GTGGGTTCGA TTACATACAG
GCCCATCAGA GTGAATATGG ATTTGAAGTA GAGGAAATAC CCCGGCAGGA TGTGGAAGCG
GTTGGTGTAA GCTCATCAAA AATCCGGGCC GCTCTAAACG AAGGAAATGT ACATACGGCA
AATCTCTTTT TGGGACGGCC CTACAACCTG ACCGGAACGA TTGTGAAAGG ACGCCAGCTT
GGCCGCACCA TTGGTTTCCC AACCGCAAAC ATGCAGGTCG ACGATCCAGC GAAGCTTATT
CCGGCCAATG GCGTTTATGC TGTCGATGTC GAATACGCCG GGCAAACCTT GGGCGGAATG
CTCAATATTG GCTTCCGGCC TACCGTAGCG GGTACGCATC AGACTATAGA AACCTATATT
TTTGACTTCG ACAAAGACAT TTACGGCGAG CATATGACGC TCCGATTCCG GGAATTTCTG
CGGCCCGAAC AAAAGTTTGA GGGGTTGCCC GCTCTGGTTG CCCAGCTCAA ACGTGATGAG
GAAGCCGCAC GAAAAGTGCT TGGAAGTTAA
 
Protein sequence
MIIYQGLDDI QPLPNAVVTS GTFDGVHRGH QIILSRLTEV AQASGGESVL ITYWPHPRTV 
VSNDSQNLKL LTTLEEKIEL LDQAGVEHLV VIPFTRSFSE LTSEEYIRQI LLDKIGTKKL
VIGYDHRFGR DREGGFDYIQ AHQSEYGFEV EEIPRQDVEA VGVSSSKIRA ALNEGNVHTA
NLFLGRPYNL TGTIVKGRQL GRTIGFPTAN MQVDDPAKLI PANGVYAVDV EYAGQTLGGM
LNIGFRPTVA GTHQTIETYI FDFDKDIYGE HMTLRFREFL RPEQKFEGLP ALVAQLKRDE
EAARKVLGS