Gene Slin_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0762 
Symbol 
ID8724492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp926388 
End bp927098 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003385624 
Protein GI284035694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.420349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC AGTTGAAATC AGCCGGAAAA AAATCCCTTG CAGTGCTTAT GGCGGCAGGT 
ATTTTATCGG GTAATGTTTT AACAAGTTGC AAGTCTTCAA AAAGATTGAA TCAAACCCAG
CAGGGTGGTG TAATTGGTGC CAGTAGTGGC GCTGTTATTG GCGGTATAAT AGGCAACAAA
ACAGGTAACA CGGCTTTGGG TGCTATTCTG GGTGCTACCG TTGGTGGTGC TGCCGGCGCC
GTTATTGGTC GGCGGATGGA CAAACAGGCG GAAGAAATAA AACGTCAGAT GCCCAATGCC
CAGGTAGAAC GGGTTGGCGA AGGGATAAAG GTTTCGCTCG GATCAGATAT TCTATTCGAT
GTCGATTCAT ATGCGTTGAA GCCGGAAACG AAGCAACAGC TAATCGAATT CGCAAAATCG
CTTAATAAAT ATGAGGATAC GGACGTCCGA ATTGAAGGTC ATGCTGACGC AACGGGATCG
GATTCTCACA ATTTAGAACT TTCGAAACAA AGAGCTAAGG CCGTTGGTAG TTTCCTTGAA
TCGCAGGGCG TGAAGACGTC CAGAGTTGAT GAGATTGGCT ATGGAGAAGC TCAGCCCGTG
GCTGATAATA GTACCGAAGC AGGACGTCGT AAAAACCGTC GGGTCGACGT AGCTGTTTTT
GCAAACAAGC AATTACAGCG CGACGCCAAA GATGGCAAGA TTGGCGAATA A
 
Protein sequence
MNNQLKSAGK KSLAVLMAAG ILSGNVLTSC KSSKRLNQTQ QGGVIGASSG AVIGGIIGNK 
TGNTALGAIL GATVGGAAGA VIGRRMDKQA EEIKRQMPNA QVERVGEGIK VSLGSDILFD
VDSYALKPET KQQLIEFAKS LNKYEDTDVR IEGHADATGS DSHNLELSKQ RAKAVGSFLE
SQGVKTSRVD EIGYGEAQPV ADNSTEAGRR KNRRVDVAVF ANKQLQRDAK DGKIGE