| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0745 |
|---|
| Symbol | |
|---|
| ID | 8724475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 906389 |
|---|
| End bp | 909406 |
|---|
| Gene Length | 3018 bp |
|---|
| Protein Length | 1005 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003385607 |
|---|
| Protein GI | 284035677 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATA TCCATTCGCT ATTCTTCCTT CTTACAACCA TACAATTCTG CCTTATTAAT
CTCTGGCCGA ATACCTCGCG TGCGTACCTG GCCGATTCTA TCCGGGTGAC TGTTACGGAA
GGGACTAACA TGGCCGCCGA CCTTTCGCCC GATAAACGTC AGATTGTCAT TGACTTGCAG
GGAACGATCT GGCTTTTACC CGCAACAGGC GGAGTTGCCA AACCACTAAC CGACCCGCTT
GGCGATTGCC GTCAGCCTAG TTGGTCACCC GACGGACAGC GGATTGCGTT CCATTCGTTC
TGGGACGGAC GGTACCATAT ATGGACAGTT TCAGCAACCG GCGGCAAACC GCAGCAGCTA
ACAAATGGCA TTTATGATGA TCGAGAACCC CACTGGTCGC CGGATGGGAA ACAGTTGGTT
TTTGCTTCGG ACAGAAGTGG TAACTACGAC ATCTGGCAGC TTAATCTGGC CGATGGCAAA
CTGACCCAGC TGACCAACGG CTCCGGCAAT GAGTTTAACC CCGCTTACTC GCCGAATGGA
AAGCAGATCG CGTATATTTC TGATCGAACG GATGCTCCCG GCGTTTACAT CCTGCCGTTG
GGCGGTACGG AAAAGCTCGT GGCACCCACA ATGAGTAAGC TGGCTGGTGT ATCGTGGCAC
CCCGATGGAT CGCAGTTGTT CTATAATTTG TTGAACAATA CCCAGAGCGG ACTAACAAGC
GTATCCGTAA GCGATGGTAA AGCCAGGATG CTAACCGAGG CCAAAGAAGA CGTTTTCCCT
TTCCGAACGA GCTGGTTTTC GATGGATAGT TATCTGTACA CGGCCGACGG TTTGTTGAAA
CGGGGTCGGT TGGGTAGTAC AACGGCGCAG GTAATTCCGT TTCAGGTCGT TATTACGCTG
CCCCGGAATA GCTACAAACG AAAAACCTAT GATTTCGACA CCCAAAAACC TCAGCTTGTC
AAAGGCATTA AAGGAACATC CATTTCGCCC GATGGCAAAC AGATTGCCTT TGCCGCGCTG
GGTGATCTAT GGCTGTTGAC TAAAGGCAAC AAGGTTCCTC AACGCCTGAC GCAGGGGAAA
GCCATGGAAG TCGAACCAGG CTGGTCACCG GATGGTAGTA AACTAACGTA CGTATCTGAC
CGAAACGGGA ACATGGACGT CTGGATTCGT GACTTAAAAA CCGGACAGGA CCGGCTTCTG
GCGGATATGT CCGATGACCT TCATTACCCA ACCTGGTCAC CAGACGGCAG CAAGATCGCC
TTTTATCAAA GCGACCCGCG AAACGCCTGG GGCCGCAGTA CGCTGTATGT GGCCGATGTC
ACGTACACGG CCGACGTGAC CGCTCCTAAA ACCAGAAAGC TGCACGAATC CTTATTCGTT
CCGAGCCAGG CAAGCTGGTC GCCGGATGGA AAGACCCTGG CGGTGTCGGC CCTTCACCCC
TACTCGTCGC GCTACCGCGA AGGGGTAAGT GAGGTGCTGC TCCTCTCCTT CGACGGAAAA
AACGACCGCT ATGTGTCGCC CGCACCCAAC CATAGCTTGG CTACCAGGGG GCAGAATGGA
CCTGTTTGGT CGCCGGACGG CACTAAAATG GCGTACGTGC TTGATGGCCT GCTGTGGATT
ACCGACGTTA AACCGGATGG CACCCCGATT GGTACACCAC GCCAGTTAAC CACCGAGCAG
GCCGAGACCC CTACCTGGAC AAGCGATTCG AAAAGCCTGC TATTTCTGGC AACTGACATT
TTCAAACAGG TTTATCTGGC AGACGGCCAC ATTGAGACCC ACCCGATGGA CCTAGCCTGG
ACAATCAGCC AGCCTACCGG AACGGTTGTT GTCCATGCCG GGCGCTTATT CGATGGGACG
GCCAACACCT ACCGCAACAA CGTCGACATT ATCATTGACG GGCACCGAAT CAAGGCTATT
CTCCCGCATC AGGTTGGTCG TTCGGGTAAA TTAATCGATG CCTCAACAAA AACGGTTATT
CCCGGCTTGT TCGAGATGCA CACCCATCAG CACTCAATGG TAGGTGAAAA AATCGGTCGG
TTGTGGTTGT CCTTCGGCAT CACTTCCATC CGCGAGCCCG GCGCTGATCC GTACGATGCC
CTCGAACGAA AAGAATCCTG GGCAAGTGGC GTGCGACCCG GTCCCCGACA ATTCTTTACC
GGCGGCTTAA CCGATGGCAA CCGAATTTAT TACGGTGCCG CCACCAGCAT CAACTCCGAC
GAGCAGCTTG ACCGTGAACT CAACCGGGCC GTACAATTGG ACTATGACCT GATCAAAACT
TACGTTCGGA TGCCCGATGA TAAACAGCAG CGAATTACAG CCTTTGCCCA TGCCCACGGA
TTACCGGTAT CCTCCCATGA GATTTTCCCG GCCATGCGTT ATGATGTCGA TGCGGTAGAA
CACATCGGCG GCACCAGTCG GCGGGGCTAT TCGCCCAAGA TTACGGCCAT GAACCACAGC
TATCAGGATG TAATTCAGTT ACTGGCCAAA TCGGGCATGA ACATTACCCC TACGGCTTCG
CTTCAGGGTG GTTTTTCGGT ACTAACAACC AACGATCCCA GCTTACTCGA AAACCGGCAG
TATAAGACCT TCTATTCGGA AGAGTATACG AATGCCCTGC AAGCCGGTTC AGCGCAGTAC
GCCAAACTCA GTCCGGGTTA CCTGAGCAAC TTCGGCAATC TCCAAAAGGG TGTAAAAGCC
CTTATTGACG CCGGAGCCCA CGTTACAACC GGCACCGACA GTCCTTTCGT ACCCTACGGC
ATGAGCCTGC ATACCGAGCT TCAATCGTTT GTGAGCGCCG GGCTAACACC CTATCAGGCC
TTGCGTTCGG CTACTTTATG GGCGGCCGAA ACGGTGGGCG TCAGTAAAGA TCTTGGATCG
GTTGAACCGG GCAAGCTAGC CGATCTGGTG ATTGTTGACG GCGATCCACT CACTCATATA
AAGGATGCGC TTAATGTAGA GCAGGTTATT CGAAACGGCG AAGTTATACC GATTGATCAG
TTACTCGCCC GCCCCTGA
|
|---|
| Protein sequence | MQNIHSLFFL LTTIQFCLIN LWPNTSRAYL ADSIRVTVTE GTNMAADLSP DKRQIVIDLQ
GTIWLLPATG GVAKPLTDPL GDCRQPSWSP DGQRIAFHSF WDGRYHIWTV SATGGKPQQL
TNGIYDDREP HWSPDGKQLV FASDRSGNYD IWQLNLADGK LTQLTNGSGN EFNPAYSPNG
KQIAYISDRT DAPGVYILPL GGTEKLVAPT MSKLAGVSWH PDGSQLFYNL LNNTQSGLTS
VSVSDGKARM LTEAKEDVFP FRTSWFSMDS YLYTADGLLK RGRLGSTTAQ VIPFQVVITL
PRNSYKRKTY DFDTQKPQLV KGIKGTSISP DGKQIAFAAL GDLWLLTKGN KVPQRLTQGK
AMEVEPGWSP DGSKLTYVSD RNGNMDVWIR DLKTGQDRLL ADMSDDLHYP TWSPDGSKIA
FYQSDPRNAW GRSTLYVADV TYTADVTAPK TRKLHESLFV PSQASWSPDG KTLAVSALHP
YSSRYREGVS EVLLLSFDGK NDRYVSPAPN HSLATRGQNG PVWSPDGTKM AYVLDGLLWI
TDVKPDGTPI GTPRQLTTEQ AETPTWTSDS KSLLFLATDI FKQVYLADGH IETHPMDLAW
TISQPTGTVV VHAGRLFDGT ANTYRNNVDI IIDGHRIKAI LPHQVGRSGK LIDASTKTVI
PGLFEMHTHQ HSMVGEKIGR LWLSFGITSI REPGADPYDA LERKESWASG VRPGPRQFFT
GGLTDGNRIY YGAATSINSD EQLDRELNRA VQLDYDLIKT YVRMPDDKQQ RITAFAHAHG
LPVSSHEIFP AMRYDVDAVE HIGGTSRRGY SPKITAMNHS YQDVIQLLAK SGMNITPTAS
LQGGFSVLTT NDPSLLENRQ YKTFYSEEYT NALQAGSAQY AKLSPGYLSN FGNLQKGVKA
LIDAGAHVTT GTDSPFVPYG MSLHTELQSF VSAGLTPYQA LRSATLWAAE TVGVSKDLGS
VEPGKLADLV IVDGDPLTHI KDALNVEQVI RNGEVIPIDQ LLARP
|
|---|
| |