Gene Slin_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0719 
Symbol 
ID8724449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp874183 
End bp875388 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003385581 
Protein GI284035651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.341706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAT TACTGATTCA CAACTATTAT CAGCAACGAG GAGGAGAAGA TGTTATTTTT 
GAACAGGAGG TTGACTTACT GCGCGAGAAC GGCATTGCTG TGGAAACCCT GATCTTTACC
AATGACCAGT TCGATGGAAC AATGCTGGGC AACGCCCAAT CGGCCATGCA GTCGTTTTTT
AACTGGCAGT CAGCTAAACG ACTCGACCTG GTCATTCGGC AATTCAGGCC AGACGTTGTA
CACATTCATA ACTTATTTTA TACCGCTTCC GCAGCGGTAA TCTGGGCTGC AAAAAAACGG
GGTATCCCGG TGGTCATGAC ACTCCATAAC TACCGGCTGG TGTGCGTCAA CGGGCTGCTT
ATGCGAGAAG GGGAAATTCC CTGCGAGCAA TGTCTGACCA GGTTGGTTGC GCTGCCGGGT
GTCCGGCATG CCTGTTTTCG GGATTCCAGC GTGCAATCGG CTCATTTGTC GGCTATTACA
TTACTGCATA AATTGACAGG CATCTGGCAG CGGGTAGATC GGTTTTTAGT GGTTACAGAT
TTCGCCCGTC AAAAAATGCT TAGCTCCTCG TTAACGCTTC GGCCGGATCA GTTGAGTGTA
AAACCCAATT TTGTAGCTGA TGCGGGCTAT GTAAATCCGA TCGATAGAGA AGACTTTTTC
CTGTATGTAG GCCGCCTGAC ATTTGAGAAG GGCATCGGGG TGCTGCTGGA TGCGGCTCGA
ATGGCTGATT TTTCGATTGA TATTATTGGC GATGGGCCGC TGGTATCTGA GGTGATACAA
AGTGCGGAGC ACACACCGAC TATTCGTTAT CGGGGTCAGC AACCGCGTCA GATTGTACTG
GAAGCCCTCA AACGCTGCCG TGCCCTAATT GTACCTTCTC TTTGGTATGA GGGCTTACCT
ACCGTAATTC TTGAGGCATT TGCAACGGGT ACACCCGTTA TCTGCTCGGA TCAGCAGAAC
CTGAACGAAA TTGTAAAAGA TAACTACAGC GGCCTCTTGT TCCGGGCGGG CGACAGCCGG
GATCTTTGCC GGGTGATTCG AGACTTTATT CAGCATGTGC CTAACCAACA ACGATTGGCG
CAGAATGCTT ACCGGGAGTT CCAGACCCGC TACACGCGCA CTATTTCGCT GCGGGCAACA
TTAACCATCT ATGAAGAGGT GATCGCCAAT CGCCAGTTAT TCAATTTGGT AGAGCAGCCA
ACCTGA
 
Protein sequence
MRVLLIHNYY QQRGGEDVIF EQEVDLLREN GIAVETLIFT NDQFDGTMLG NAQSAMQSFF 
NWQSAKRLDL VIRQFRPDVV HIHNLFYTAS AAVIWAAKKR GIPVVMTLHN YRLVCVNGLL
MREGEIPCEQ CLTRLVALPG VRHACFRDSS VQSAHLSAIT LLHKLTGIWQ RVDRFLVVTD
FARQKMLSSS LTLRPDQLSV KPNFVADAGY VNPIDREDFF LYVGRLTFEK GIGVLLDAAR
MADFSIDIIG DGPLVSEVIQ SAEHTPTIRY RGQQPRQIVL EALKRCRALI VPSLWYEGLP
TVILEAFATG TPVICSDQQN LNEIVKDNYS GLLFRAGDSR DLCRVIRDFI QHVPNQQRLA
QNAYREFQTR YTRTISLRAT LTIYEEVIAN RQLFNLVEQP T