Gene Slin_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0706 
Symbol 
ID8724436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp861081 
End bp861722 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionYP_003385568 
Protein GI284035638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.240923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.524025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTA TAAAATCGTT ACTTGATTTT TTGCTTCATC TCGACCGTTA TCTTGATTTG 
TGGGCAAACG AATATGGCGT GTTATTATAT GCCATTCTCT TCCTGATTAT ATTCACAGAG
ACTGGCCTTA TTTTCATGCC ATTACTACCC GGCGATTCGC TGTTATTCGC GGCCGGTGCC
CTGGCGGCTC GTCCCACGAA TGAACTTAGC GTTTGGGTTA TTATCCCCCT CCTCATCATA
GCAGCCCTTA TGGGCGACAA TGTCAACTAT TTTGTGGGTA AATACCTGGG AACCAAGATT
AAATCAAGAG AGCGAATTCT GTTCTTTAAG CGCGAATACA TTGCTGAGAC CGAGAAGTTT
TATGCCAAAT ATGGCGGACG AACCGTTATC ATAGCCCGGT TTATACCTAT CGTTCGGACC
ATCGCTCCCT TTGTTGCCGG TGCCGGTAGC ATGAGTTATG GTACGTATAT TAAATTCTGT
ATCATGGGTG CCATTCTGTG GGTAACCAGC ATTTCGCTGT TGGGCTATTT CTTCGGCAAC
TTCCCTATTG TGCAGAAAAA CTTCGAATTA GTAGTCTTTG GTATCGTTGG ACTGTCCATA
CTTCCGATCC TTTTCGAATT TGTTAAGAAA AAGATGCGGT AA
 
Protein sequence
MDLIKSLLDF LLHLDRYLDL WANEYGVLLY AILFLIIFTE TGLIFMPLLP GDSLLFAAGA 
LAARPTNELS VWVIIPLLII AALMGDNVNY FVGKYLGTKI KSRERILFFK REYIAETEKF
YAKYGGRTVI IARFIPIVRT IAPFVAGAGS MSYGTYIKFC IMGAILWVTS ISLLGYFFGN
FPIVQKNFEL VVFGIVGLSI LPILFEFVKK KMR