| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0700 |
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| Symbol | |
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| ID | 8724430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 857155 |
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| End bp | 857811 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003385562 |
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| Protein GI | 284035632 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00980919 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.316207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGTGG ACGATCACTC AATCGTTCGT GATGGCATTC GACTACTGCT CGAACAAGCC
GATGGATTAG AAATTATTGA TGAAGCTAAT GATGGCGAAG AAGTACTCGA TAAGCTGAAG
GTGCTTCAGC CTGACCCGAG CCTTCTGCCA GATTTGATTC TGATGGATAT ATCCTTGCCT
GGTATGTCGG GTATTCAAAC GACCCAGGTG ATTAGTCGGC TGTATAAGAA TGTTCGGGTG
CTTATGCTGT CAATGCATAA CAATGAGGAT TATATCTTGC GCTCGGTTGA GGCCGGTGCT
TATGGTTACA TTCTGAAAGA TTCATCGTCC GATGAAATGA TAAAAGCCAT CCGCACCATT
GCTTCTGGCG AAAAATACTA TAGTTCTCCG GTAGCGTCTA TCATTTTGAG TGGTTATATG
CAGCAACTCA AGAAGGGAGA CCGCCACGGT CGGGCTGAGC GGCAGTCCAA ACTGTCGAAT
AAAGAGAAAG AGATTCTTCA GTTTTTGGTT GATGGCATGA GCAGCCGCGA AATTGCCGAA
AAACTTCAAC TCAGTGTTCG GACGGTAGAT AACCATAGAG CCAATATGAT GCGCCGATTA
CAAGTTCGTA ATGCTGCTGA ATTGGTCAGA ATGGCAGTTG AAGACAAGCT GATTTAA
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| Protein sequence | MLVDDHSIVR DGIRLLLEQA DGLEIIDEAN DGEEVLDKLK VLQPDPSLLP DLILMDISLP
GMSGIQTTQV ISRLYKNVRV LMLSMHNNED YILRSVEAGA YGYILKDSSS DEMIKAIRTI
ASGEKYYSSP VASIILSGYM QQLKKGDRHG RAERQSKLSN KEKEILQFLV DGMSSREIAE
KLQLSVRTVD NHRANMMRRL QVRNAAELVR MAVEDKLI
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