Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0654 |
Symbol | |
ID | 8724383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 821150 |
End bp | 822466 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | amine oxidase |
Protein accession | YP_003385516 |
Protein GI | 284035586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.239854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCAG ATTCATCCAG TTCCAGTAAT GGAATAACCG ATAAGCCTGT TCTGATTATT GGTGCCGGTA TGGCCGGGTT AACCTGTGCC GTTTACCTTA AACAAGCGGG CATTGATGCC AGGGTACTCG AAGCGGCCGA TGGCGTTGGC GGCCGGGTTC GTACCGATAC CGTAGATGGC TTTCGACTCG ACCGGGGTTT TCAGATCCTG CTGACAGCCT ACCCGGAAGC CCGACGGCTA CTCAATTACA GTGCGCTGAA TTTGCAGTAC TTCCGCTCCG GCGCATTAAT CCACCACCAG ACGCCCACTC CCGAATGGAT GACGCTCCTA AATCCCTTTC AGGAGCCACT TTCTGTCTTT AAAACGCTGG CATCGCCGGT TGGCACCCTG GCCGATAAAC TCCATATTGT GGAGCTCCTC CGCCGAACAC AGGAGTTGCC CATCGACGAG CTTTTCCGGC AAACACCCGT CAGTACGCTG GATTTTCTGC TTGGCATGGG GTTTTCCGGG CAAATGATCG AACGATTTTT CCGGCCGTTT TTCGGGGGTG TTTTTCTGGA AGATATGCTC ACAACCTCCA GCAATTTCTT TGAGTTTTGC TTTCGGATGT TCTTTATTGG AGGGGCGGCT GTTCCAGCCA ACGGCATGGA AGCCATTCCG AATCAACTGG CCGGTTGGCT GGCTCCCGGT CAGATTCGGC TGCAAACCCC CGTCAAACGA ATTGACGGCA ATACGGTTTA CCTTAACTCA GGCGAAACCC TGACCGGCCG GGCGGTTGTA CTGGCTGTCG ATGCCGCTCA GGCGGCTCAG TTAACGGGTC GCCCGTTGCC GACTGAGCAG GAGTTTAATC ACACCACCTG CACATATTTT GCGGTTAGAC CCGATCAGTT CAAAAATCGG CCTACAGAAG AAAAATTACT ATTGCTGAAC ACGCACCGGA GTTCGGCAGT GCATAACGTG GCCATTCTGA CCGATGTAGC ACCAACCTAC GCGCCAGCCG GGCAAACGCT GGTTTCGGTG AGTACCCAAA GTCTGGTTTT GCTGGATGAA GCCGCCTTAA CGGCCAAAAT ACGCACTGAA CTCAGCAACT GGTTTGGCGA AGATGTGCAA CAGTGGCGGC ATTTGCGCAC GTATCACCTA CCCCACGCTT TACCAGCCTA CAATCCTGAA CAAGCCGGTA ATGATGCCAT CCGGCAACCC CTGAAATTAT CAGATAGCTT GTACCAGTGC GGGGATCAAA CAGCATATCC GTCCCTGAAT GCCGCCATGC AAACGGGTCG GCAAGTTGCG GAAATGATTA GCGGAGTGGT GAATTAG
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Protein sequence | MSPDSSSSSN GITDKPVLII GAGMAGLTCA VYLKQAGIDA RVLEAADGVG GRVRTDTVDG FRLDRGFQIL LTAYPEARRL LNYSALNLQY FRSGALIHHQ TPTPEWMTLL NPFQEPLSVF KTLASPVGTL ADKLHIVELL RRTQELPIDE LFRQTPVSTL DFLLGMGFSG QMIERFFRPF FGGVFLEDML TTSSNFFEFC FRMFFIGGAA VPANGMEAIP NQLAGWLAPG QIRLQTPVKR IDGNTVYLNS GETLTGRAVV LAVDAAQAAQ LTGRPLPTEQ EFNHTTCTYF AVRPDQFKNR PTEEKLLLLN THRSSAVHNV AILTDVAPTY APAGQTLVSV STQSLVLLDE AALTAKIRTE LSNWFGEDVQ QWRHLRTYHL PHALPAYNPE QAGNDAIRQP LKLSDSLYQC GDQTAYPSLN AAMQTGRQVA EMISGVVN
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