Gene Slin_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0654 
Symbol 
ID8724383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp821150 
End bp822466 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content54% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003385516 
Protein GI284035586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.239854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCAG ATTCATCCAG TTCCAGTAAT GGAATAACCG ATAAGCCTGT TCTGATTATT 
GGTGCCGGTA TGGCCGGGTT AACCTGTGCC GTTTACCTTA AACAAGCGGG CATTGATGCC
AGGGTACTCG AAGCGGCCGA TGGCGTTGGC GGCCGGGTTC GTACCGATAC CGTAGATGGC
TTTCGACTCG ACCGGGGTTT TCAGATCCTG CTGACAGCCT ACCCGGAAGC CCGACGGCTA
CTCAATTACA GTGCGCTGAA TTTGCAGTAC TTCCGCTCCG GCGCATTAAT CCACCACCAG
ACGCCCACTC CCGAATGGAT GACGCTCCTA AATCCCTTTC AGGAGCCACT TTCTGTCTTT
AAAACGCTGG CATCGCCGGT TGGCACCCTG GCCGATAAAC TCCATATTGT GGAGCTCCTC
CGCCGAACAC AGGAGTTGCC CATCGACGAG CTTTTCCGGC AAACACCCGT CAGTACGCTG
GATTTTCTGC TTGGCATGGG GTTTTCCGGG CAAATGATCG AACGATTTTT CCGGCCGTTT
TTCGGGGGTG TTTTTCTGGA AGATATGCTC ACAACCTCCA GCAATTTCTT TGAGTTTTGC
TTTCGGATGT TCTTTATTGG AGGGGCGGCT GTTCCAGCCA ACGGCATGGA AGCCATTCCG
AATCAACTGG CCGGTTGGCT GGCTCCCGGT CAGATTCGGC TGCAAACCCC CGTCAAACGA
ATTGACGGCA ATACGGTTTA CCTTAACTCA GGCGAAACCC TGACCGGCCG GGCGGTTGTA
CTGGCTGTCG ATGCCGCTCA GGCGGCTCAG TTAACGGGTC GCCCGTTGCC GACTGAGCAG
GAGTTTAATC ACACCACCTG CACATATTTT GCGGTTAGAC CCGATCAGTT CAAAAATCGG
CCTACAGAAG AAAAATTACT ATTGCTGAAC ACGCACCGGA GTTCGGCAGT GCATAACGTG
GCCATTCTGA CCGATGTAGC ACCAACCTAC GCGCCAGCCG GGCAAACGCT GGTTTCGGTG
AGTACCCAAA GTCTGGTTTT GCTGGATGAA GCCGCCTTAA CGGCCAAAAT ACGCACTGAA
CTCAGCAACT GGTTTGGCGA AGATGTGCAA CAGTGGCGGC ATTTGCGCAC GTATCACCTA
CCCCACGCTT TACCAGCCTA CAATCCTGAA CAAGCCGGTA ATGATGCCAT CCGGCAACCC
CTGAAATTAT CAGATAGCTT GTACCAGTGC GGGGATCAAA CAGCATATCC GTCCCTGAAT
GCCGCCATGC AAACGGGTCG GCAAGTTGCG GAAATGATTA GCGGAGTGGT GAATTAG
 
Protein sequence
MSPDSSSSSN GITDKPVLII GAGMAGLTCA VYLKQAGIDA RVLEAADGVG GRVRTDTVDG 
FRLDRGFQIL LTAYPEARRL LNYSALNLQY FRSGALIHHQ TPTPEWMTLL NPFQEPLSVF
KTLASPVGTL ADKLHIVELL RRTQELPIDE LFRQTPVSTL DFLLGMGFSG QMIERFFRPF
FGGVFLEDML TTSSNFFEFC FRMFFIGGAA VPANGMEAIP NQLAGWLAPG QIRLQTPVKR
IDGNTVYLNS GETLTGRAVV LAVDAAQAAQ LTGRPLPTEQ EFNHTTCTYF AVRPDQFKNR
PTEEKLLLLN THRSSAVHNV AILTDVAPTY APAGQTLVSV STQSLVLLDE AALTAKIRTE
LSNWFGEDVQ QWRHLRTYHL PHALPAYNPE QAGNDAIRQP LKLSDSLYQC GDQTAYPSLN
AAMQTGRQVA EMISGVVN