Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0637 |
Symbol | |
ID | 8724366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 799853 |
End bp | 803053 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385499 |
Protein GI | 284035569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0627569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC ATCTTCTCTC TCTTCTTTTA TTGCTCCTTT TTGCCGGGTT TAGCCTTGAG GAAGCAAGGG CACAAACAAC GCAGGCCTCC ATTTCAGGAG TTATTTCCGA TACGCAAAAA CAGGGACTTC CGGGAGCTAC GGTTCGGGTG CGAAACGAAT CGACGGGCTT TACAACCGGC ACTGTTACCA ATGTCCAGGG CGAATATCAG TTTAAAGAAT TACCCCTGGG CGGTCCCTAT ACCATTTGGG CTACGGCGGT GGGGCTGGGC GAGCAACGCC GAACCGGCTA CATGGTCAAC CAGGGCGACG CGATCCGGAT TAGTCTGACC ATGCAGGAAG CCGGTCAGGA TTTGGAGGTG GTACAGGTAG TGGCATCGGG TCTGAAAAAC AAGACCGATA ACCTGGGGGC GGCTACGGCC ATCACGGCTA AAACGCTGAC AACCATGCCT GTCAACGGGC GTAACTTTAC CTCGCTGGTT AACCTGTCAC CCTTAAGTGG CAACAATGGC AACCTGTCGG GGCAGATTGG CTCATCGACC AACTTTACTA TCGACGGGAT GACGGCCAAA AACCCAACCT CGGCCGGTGC AACGACCAGC CGCAGCGGAG CCCCTTATTC GATCTCCATT GAAGCCGTTC GGGAATTTAA AGTGATTACC AACCAGTACG ATGTGGTGTA CGGACGCGCC GGGGGCGGTA TCGTGAGTGC CGTAACCAAA TCGGGAACCA ACAAACTGGC GGGCAGCGTC TTTAACTACA CCCGCGCCAA CTGGCTGTCG AGCAAGTACG ACATTCGCGG TAACCTGCGT AACAACAAGT TCTCGACCAA CCAGTTCGGG TTTTCGCTGG GTGGCCCGAT CATCAAAGAC AAACTGCATT ACTTCGTGGT CTGGGATCAC CAGCAGGATT CGCGCCCGCT GATTATCGCC GACGTGCAAA CACCGCTCGA CGAGAGCCGC TTTAACGTGA CACGCGCCAC CCTCGACCGT TTTGTCGATA TTGCCCGTAG TAAATATGGC GTAGCCAACA CGCCCCAATA CGGCACGTTC GACAAGAGCC GGGGTTCCGA TGCCGCTTTT GCCCGTATCG ACTGGCAGAT CAACCAAAAC AACCTGCTCA CCATTCGGGA CAACTACACC AACGACCGCA ACAAGCTGGG CTTGCAGGAT AACACGGCCG TTAATATCTA CGAATCGTAC GGCAACGACT TCAACATCGA CAACAGTCTG CTGGCTACCC TGCGCACGAC CATTACGCCC AAGATTACCA ACGAGCTGAA ACTTCAGCAT CTGTACACCT ACCAGAAAAG TGCCCCCGGC GATCAACTGC CCGGTGCCAA CATTCCGCGG AATATTGTCG AAAACGTTGT GTCTACGGTC AATGGAGGCA CATTGTCGAC CAATATTCAG ATGGGCGGTC ATCGTTTTGC GCAGGAAGGT TTCACGAATA ATGTGGTGCA ACTGGTCGAC AATCTCTATT ACAATACCGA CCGGATTCAG TACACCTTTG GTCTGGACCT GATGTACACG CACGCCCGTT CGCTCTATGG CAGTGAGGTC AATGGTCGCT TCCATTACAA TATTGATGGT ACGACTTCAT CGCTGGACAA ATTCAACGCC CTGCAACCGT ACCGATACTA CCGCGAGGTG CCGCTGGTGG CCGACCCTAC CGTTGTTGGT AAAACCCTTA ACGCGGGTGT TTATGGGCAG TTGAGTACGC AACTGGCACC CGGACTCGAC ATGACCGCCG GTCTGCGCTT CGATTATGCA CACTACCCGA AGGCTCCGCT GAACCAGTTG GTGCTGGACG AACTGAATCT CCGGACCGAC AATGTGATTA AATCGTTCAT CGTACAACCC CGCCTGCAAC TTAACTGGGA CGTGAACGAG CGGCACACGG ATTTTGTCCG CTTCGGGGGC GGTGTGTTTG CATCGGACAT CAACAACTAC ATGATTATCA ATAACCTGAC CTTCGACGGA AAGCACTTTG CTACGGTCGA CGTGCGGGGA GTCAACGTAC CAACGCCCGA CTTTGCGGCT TACCGGCAGA ACTACGCCAG CATTCCAACG CTGGCGGCTT TTCAGGTGCC AACGATCAAC ATGACTGGTC CGAATGCCAA AGTGCCGGTT CTTTACAAAG CCAACCTGTC CTATTCGCAC TTCCTGACCG AGAAACTGCG CGTTGGTGTC GCGGGTTATA TGTCGCTGGG TCGCAACAAC TACATGTATG TCGACCGGAA CATGGTGGCT GACCCATTCT TCCGACTGGC TAACGAAGAT AACCGGGGTG TGTATGTGCC GCTGGCTTCC ATGCCAACGA GCGGTGTGGG CGACTGGCAA CTGGGGCGCA TCAGCCAGAA GCTGGGCCGG GTGCTGGAGT TGAACAGCGT AGGACGCGTG AATCAGTTTG CTGTCGTGGC CGATGCTACC TGGCAGTACT TCCGTGATGG TGAGATAACG GCCAGCTTCA CCTGGAACGA TACCCGCGAC AACACGTCTT ACAATGGTAA CGTAGCCAAC ACCGCTACGC TGTCGGTACC GGTAAAAGAT GATCCGCGCA ACCTGAGCAA AATGACGTAT TCGGACAACC ATTTTCGGAA TAAGGTTGTG TTTTACGGCA CGCTACCATC GTTCTTCGGC ATTACGCTGG GTGTTCGCTA TTCGGGTATT GGGGGTACGC GGTACTCGCT GCTGTCGGGT GCTAACACCA ATGCCGACTT TGTTGCAACG AACGACCTGG CCTTCGTCTT CGACCGTAAC AGTGAAGGCG TTCCGGCCAA TGTGCGGACG GGGCTGCAAA CGTTGCTGGA TAGCCCAACG GCGAGCCAGA GCCTCAAGAA TTATATCAAT GCGTATTCGG GTCAGATTGC CGAACGGAAC GGGGGCATCA ATGGCTTTTA CGGCGTATTC GATATTCGGG CGATGAAGCG GTTCCGGTTC AATAAAAACC ACGCTGTTGA GCTTTCGGCC GATATTTTCA ACTTCGCTAA CTTCCTGAAA CGCGACTGGG GCGTCAACAA ATCGCTGGGT ACGCAGGCAC TGTATGCGCT GGGTGTTCCG GCTTCCGGCA CCACGGCTGC CCTTCCCGGT TTTAGTCAGG CCAGTCAGCG GTTCAACTAC CGGGTCAATA ATTCGGGCGT TGTAACCCCG TCGGGCGATC CGTTCCAGGT TCAGATCGGC TTACGGTATA GCTTTCAATA A
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Protein sequence | MKKHLLSLLL LLLFAGFSLE EARAQTTQAS ISGVISDTQK QGLPGATVRV RNESTGFTTG TVTNVQGEYQ FKELPLGGPY TIWATAVGLG EQRRTGYMVN QGDAIRISLT MQEAGQDLEV VQVVASGLKN KTDNLGAATA ITAKTLTTMP VNGRNFTSLV NLSPLSGNNG NLSGQIGSST NFTIDGMTAK NPTSAGATTS RSGAPYSISI EAVREFKVIT NQYDVVYGRA GGGIVSAVTK SGTNKLAGSV FNYTRANWLS SKYDIRGNLR NNKFSTNQFG FSLGGPIIKD KLHYFVVWDH QQDSRPLIIA DVQTPLDESR FNVTRATLDR FVDIARSKYG VANTPQYGTF DKSRGSDAAF ARIDWQINQN NLLTIRDNYT NDRNKLGLQD NTAVNIYESY GNDFNIDNSL LATLRTTITP KITNELKLQH LYTYQKSAPG DQLPGANIPR NIVENVVSTV NGGTLSTNIQ MGGHRFAQEG FTNNVVQLVD NLYYNTDRIQ YTFGLDLMYT HARSLYGSEV NGRFHYNIDG TTSSLDKFNA LQPYRYYREV PLVADPTVVG KTLNAGVYGQ LSTQLAPGLD MTAGLRFDYA HYPKAPLNQL VLDELNLRTD NVIKSFIVQP RLQLNWDVNE RHTDFVRFGG GVFASDINNY MIINNLTFDG KHFATVDVRG VNVPTPDFAA YRQNYASIPT LAAFQVPTIN MTGPNAKVPV LYKANLSYSH FLTEKLRVGV AGYMSLGRNN YMYVDRNMVA DPFFRLANED NRGVYVPLAS MPTSGVGDWQ LGRISQKLGR VLELNSVGRV NQFAVVADAT WQYFRDGEIT ASFTWNDTRD NTSYNGNVAN TATLSVPVKD DPRNLSKMTY SDNHFRNKVV FYGTLPSFFG ITLGVRYSGI GGTRYSLLSG ANTNADFVAT NDLAFVFDRN SEGVPANVRT GLQTLLDSPT ASQSLKNYIN AYSGQIAERN GGINGFYGVF DIRAMKRFRF NKNHAVELSA DIFNFANFLK RDWGVNKSLG TQALYALGVP ASGTTAALPG FSQASQRFNY RVNNSGVVTP SGDPFQVQIG LRYSFQ
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