Gene Slin_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0618 
Symbol 
ID8724346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp768920 
End bp773374 
Gene Length4455 bp 
Protein Length1484 aa 
Translation table11 
GC content50% 
IMG OID 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003385481 
Protein GI284035551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGG AAGGCGTATT TTTTCCAGAT AATAAACTTG CGGATCTTCG AATTAGCTGG 
ACTTCCTCAG GTGAACTGAC CGGCACGATC TTATCTGAGT TTATATCGAA GGAGGTACTA
AGTTCCCTTT GTTTCAACCT CACTCATCGA AATAGTGCCT GTCTGAACCT AAGCAACGAT
AACAGTTTGC AGGGAGTCTG GCAAATCGCT CCCGTCAAGG AGGGGTATCT CGCTACGTTT
CAAGCGCATA AAACAAACTA CAATCAGGAA AATACCATAC AGGAAAGTCC AGACGAACTC
CTTCGTCGTC TTGAGTACAG GCGAACCTTC AATGGCCTGA CCAGCACCTT AATTAACCTG
CCTTTTTCGC AACTCGACGA GTTTTTGCTC AACGCCCTGG AACAAATGGG GCGGTATACC
GGAGCTGATC GCTGTTATAT GTTCAGGTAT TCAGCATCGG ACCACGAGAT GAGCTGTACC
CACGAATGGT GTGCAACAGG TATTTTACCC CAGCAGGAAA TGTTGCAGGA CTTACCGGTT
AGCCTATTTC CGTGGTGGCA CCAGAACATG GTACGTGGTG AAACCATCTG CCTGTACTCG
CTGGAAGACC TGCCCGCTGA GGCTCAGGCG GAACGAGACA TATTGGCCGA TCAGCAAATT
CTATCCCTGC TGGTCATTCC AATTATGATG GAACAGCGCC CTCTGGGGTT TATCGGGTTT
GATGCGGTTA CGGAAGCCAG GCATTGGAAT AGCGAGGATG TCGAATTGCT GGAAACGTTC
TCCCAACTGT TAGTCAATAC CTTAAAGCGA TTCTCACATG AGCAGTCGAT CATTACGTTC
AGTCGACGGG AATCGATCAT GAATCAGATT CACGAAACCT TGCTGGCTCG TGAAGTCACT
CCATTCGGTG CGCAATTGCA GGTATTGCAC CATCTGTATA CGCTTATACC GGCTGAGTTG
ATGGCTATAT ACAATGTGGC AGAAGAACCA CCGCTTGCCG TCGCTACCAG CTGGCTAATA
AGTGGAAATG CCACGAGTGA GTTCGATACA CGTTATCCCG AAACGATACC TTTACAGAAC
TGTTCCGAAC ATGAACGGGC CCAATTCCTA TCAGCAGCGG TAAAGGCCGG GCGGGCCTGC
GAGTCGGTAT GCTGCCTACC TATTCAGCAG GAGAGCCGAC TGTTGGGGTA CCTCCTGATT
GCCGACCCAC GCAGACACCT GTTAACCCAG GACGATCTGG CACTTCTTCA ACGGGCGGCC
TATCTGCTGG CCGACTTCCG GGTCCGAAAA GAATTGGTGG AACAGCTACA GGTGCAGACT
AATCAACTGA CCGAGACCAA CCAGCTCTTA TCGGCAATCG TAGAAAGTAC CCCTGTCGGC
CTTGCGTTGT TCAGCCCCAA ATGGCAGCAT GACCGGATTT ATGACTTTGC GTATCAGTTT
ACCAACCCGG CCAATGTCAG GCTTACCGGC CGCAGCCTCG ACCAGATGAG AGACAACACC
TTGTTGACGC TCTTTCCCGA AATAAACCAG GGAGGGTTGT TTGACAAACT GGTTCAGACC
GCACTTACCG GGCAGGCCCA GCATTTTGAT GAATACATTC GTCATGATGG GATGCGTATG
TGGGCTTACT TTACGCTCAT CCGGATTGGA CAGGATGTTC TTTTTACCGT GCAGGATATT
ACTCCGCAAA AAGAAGCAGA AGAACTCCTG CGCCATCAAA ACGAACTACT GGAAAAGCAG
GTTGAGCTAC GAACCAACGA AATCAGGCAC CTGAATGCGC TTCAGAAAGC CATCATCAAT
TACGCTGCGC TGGGATTTGC CGCAACAGAT ACACAAGGAA TTATTCAGCT GATAAACCCG
GCTCTGGAAG TAATGACGGG GTATAAAGCC CATGAATTGG TCGGCAAGGT CTCTCCCGGC
GTGCTTCGGG CTCCCCAAAC GCACCAGCGG CTAATTCAGC AGCTTACTCC CCACCTGGAC
GATCCAACAC TGGAGGGTGA TGCGCTTGTA ACGGCCTATG TCCAGGAACA TACTTTTTTA
CAACGGGAAA ATACGCTCCA GCATAAAGAT GGCCATCTGC TACCGGTTCT CTCAACGGTC
AGCGGTTTAT ATGACGAGCA GGGAGTATTG CTGGGGTATG TTGATTTTGT AACGGATATC
TCGGTGTTTA AACAGGCGCA GGAAACAGCA AAGAAAGCCT ACCACCGGCT TCAGTTAGCT
GCCGATACGG CCGGACTAGG CATTTGGGAA TATGACCTGG CGACAGAAAA GTTCAGTCTG
GACGACCAGA TGTACCGTAT CTGTGGCATC GATAACCAGC ACATGCCGCT TGACGCGGAA
CTGTTCAGCA ACCTCATTCA CCCCGCTGAC CGGGAACGCT TTCAACAGGC AAAGTCATAT
GCACTGGCGA ACAAGCTAAC CAGTAGTCTT AATTTTCGTC TGCTGCAACC CAGTGGGCAG
CTTGTTTACG GCGAAATGCG CATGCAGCCC CTGCTGGATG AGCACCAGCA GCCGATTCAG
TTAATTGGCG TCGTGCAGGA CCGAACGGCT CAACGACAAA CGGAACTGGC GCTTCAGCGA
AGCAAGGAAC GGTATCTGGC TTTAGTTAAC AACCTGCATG AAATTGTTTT CCAGATAGAT
TTAACCGGGT CGTTCACCTT CCTGAATAAC GCCTGGACCG AAACGATTGG TTACCCGCTG
GCAGATTCTA TCGGTCAATC CATTCTTTCA TTTCTTTCTC CCGCCGATCA TCAGGTATGT
AGCCAGTTGA TCGATCAGTT GGTGACTAAA GAAACGCAGC TCTGCCAAAA GACAGTTGCA
TTTATTGCTC AGAATGGCGA AACAAAAATA GCCGAAGTGG ATGCCCGGCT CCTGACCGAC
GCACAGGAGT TACCGATAGG CATAACTGGC ACATTCCGGG ATGTGACGCA ACAAAACAAA
GCTACCGATG CGCTGCGGCA AAGTGAACAG CGCTTCAAAG CCATTTTTAA TTCGACCTTC
CAGATGATAG GACTCCTCTG CCCGCAGGGG ACTATCCTCG AAATGAATGA TACCGCCTGT
CTGGCATCTG GAAAAAGCAT GGATGAACTG GCCGGTAAGT ACCTGTGGGA AACGTATTGC
TGGCAACTCT CACCGGCGAT CTGGCAAAAA TGCCGGGCAG CCGTTACCAG GGCGGCAGGC
GGAGAACCCG TAAATTACGA AACCAACATT TGGCTGGCGG GTCAAACGGT AGTTCCCATC
GACTTTTCGG TACGGCCATT GTTCAACGAT GCCGGAGAGG TTGTGCTGTT GATTGTGGAA
GGACACGACC TGTCCAGTTA CAAGCAGATG CAGCAGGCGT TACAGGAAAG TGAGCAACGC
TTCCGGGAAA TTGCCGAGAA AGTAGACTCT CTGTTCTGGA TTCGGGAAGG CGGATCGCCC
CGGTTCAGCT ACGTCAACCC CATGTATGAA CGCATAACGG GAAGGTCCTG TGAAAGCTTA
TATGAGGACC CAACTTCGTT TCTGGACTTT GTAGTGGAGG AAGACAGGCC CATGCTTCTA
CAGCTTTTAA AGTTGGACCA GCCTTATGAC GGCCCGATTC ATTTCCAGGC CAGAATAGCC
GGTAAAATCC GCTGGTTTGA AATCCGGGGC TTTTTCACTA AAGATGCAAC TGGTAAAGTA
GTGAGGCATA TTGGAGTTGG CCAGGATGTG ACCAGTCAGA TGGAGAATAA ACAAGTGATG
GAAGCAGCCC TTGAACGGGA GCAAGCCCTG AACAAGCTTA AATCCCTGTT TGTGTCCATG
GCCTCGCACC AGTTTCGAAC ACCTCTGATG ACCATTCAGT CCAGCTCAGA ATTAATTGAG
TTTTTAGTTA ACCAGGATAA TACCGACCAA AAGCCAGCTG TGCAGCGCCA CCTGCACCGA
ATTAAGGGGG AAGTCGGGAA ATTAACTAAT ATTCTGGCCG ACATTCTGTT GTTGGGTCAG
TCGGACTCCG GCAAGATTTC TATGCAGGCC GAACAGGTGA ATCTGTTGCC CTATATTACC
CAGATTCGGG ATGACTATTT TTCCACTGGG TTAGGTCAAC GGCGTGTTCT GATCCAGGCC
AATGAACAGG ACTACTGGGC TGCTGTCGAC AGAAAGCTAA TGAGTCACGT ACTACAGAAT
CTGTTGACAA ATGCCACGAA ATATTCTAAG GGCGATCCCC TGATTCGACT CACTCAAACG
GAGCAAACGA TCCAACTAGA GGTAATCGAT GATGGTATTG GTATCCCAGC CGGGGAGTTG
CCCCTTTTGT TTGATTCTTT TTTCCGGGCC AGTAACGCCC GCCAGTTTCA GGGAACAGGC
TTAGGCCTGT CGATCGCCCG TCAGTTTGTC GAACTGCATA ATGGCACCAT AACCGTACAA
AGTGAAGTAG GGAAAGGGAC AACGTTTACA GTTACCTTAC CAGCCGGAGA GCCCCCCTTG
TCAGATGCTG TTTGA
 
Protein sequence
MYLEGVFFPD NKLADLRISW TSSGELTGTI LSEFISKEVL SSLCFNLTHR NSACLNLSND 
NSLQGVWQIA PVKEGYLATF QAHKTNYNQE NTIQESPDEL LRRLEYRRTF NGLTSTLINL
PFSQLDEFLL NALEQMGRYT GADRCYMFRY SASDHEMSCT HEWCATGILP QQEMLQDLPV
SLFPWWHQNM VRGETICLYS LEDLPAEAQA ERDILADQQI LSLLVIPIMM EQRPLGFIGF
DAVTEARHWN SEDVELLETF SQLLVNTLKR FSHEQSIITF SRRESIMNQI HETLLAREVT
PFGAQLQVLH HLYTLIPAEL MAIYNVAEEP PLAVATSWLI SGNATSEFDT RYPETIPLQN
CSEHERAQFL SAAVKAGRAC ESVCCLPIQQ ESRLLGYLLI ADPRRHLLTQ DDLALLQRAA
YLLADFRVRK ELVEQLQVQT NQLTETNQLL SAIVESTPVG LALFSPKWQH DRIYDFAYQF
TNPANVRLTG RSLDQMRDNT LLTLFPEINQ GGLFDKLVQT ALTGQAQHFD EYIRHDGMRM
WAYFTLIRIG QDVLFTVQDI TPQKEAEELL RHQNELLEKQ VELRTNEIRH LNALQKAIIN
YAALGFAATD TQGIIQLINP ALEVMTGYKA HELVGKVSPG VLRAPQTHQR LIQQLTPHLD
DPTLEGDALV TAYVQEHTFL QRENTLQHKD GHLLPVLSTV SGLYDEQGVL LGYVDFVTDI
SVFKQAQETA KKAYHRLQLA ADTAGLGIWE YDLATEKFSL DDQMYRICGI DNQHMPLDAE
LFSNLIHPAD RERFQQAKSY ALANKLTSSL NFRLLQPSGQ LVYGEMRMQP LLDEHQQPIQ
LIGVVQDRTA QRQTELALQR SKERYLALVN NLHEIVFQID LTGSFTFLNN AWTETIGYPL
ADSIGQSILS FLSPADHQVC SQLIDQLVTK ETQLCQKTVA FIAQNGETKI AEVDARLLTD
AQELPIGITG TFRDVTQQNK ATDALRQSEQ RFKAIFNSTF QMIGLLCPQG TILEMNDTAC
LASGKSMDEL AGKYLWETYC WQLSPAIWQK CRAAVTRAAG GEPVNYETNI WLAGQTVVPI
DFSVRPLFND AGEVVLLIVE GHDLSSYKQM QQALQESEQR FREIAEKVDS LFWIREGGSP
RFSYVNPMYE RITGRSCESL YEDPTSFLDF VVEEDRPMLL QLLKLDQPYD GPIHFQARIA
GKIRWFEIRG FFTKDATGKV VRHIGVGQDV TSQMENKQVM EAALEREQAL NKLKSLFVSM
ASHQFRTPLM TIQSSSELIE FLVNQDNTDQ KPAVQRHLHR IKGEVGKLTN ILADILLLGQ
SDSGKISMQA EQVNLLPYIT QIRDDYFSTG LGQRRVLIQA NEQDYWAAVD RKLMSHVLQN
LLTNATKYSK GDPLIRLTQT EQTIQLEVID DGIGIPAGEL PLLFDSFFRA SNARQFQGTG
LGLSIARQFV ELHNGTITVQ SEVGKGTTFT VTLPAGEPPL SDAV