Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0618 |
Symbol | |
ID | 8724346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 768920 |
End bp | 773374 |
Gene Length | 4455 bp |
Protein Length | 1484 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_003385481 |
Protein GI | 284035551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTGG AAGGCGTATT TTTTCCAGAT AATAAACTTG CGGATCTTCG AATTAGCTGG ACTTCCTCAG GTGAACTGAC CGGCACGATC TTATCTGAGT TTATATCGAA GGAGGTACTA AGTTCCCTTT GTTTCAACCT CACTCATCGA AATAGTGCCT GTCTGAACCT AAGCAACGAT AACAGTTTGC AGGGAGTCTG GCAAATCGCT CCCGTCAAGG AGGGGTATCT CGCTACGTTT CAAGCGCATA AAACAAACTA CAATCAGGAA AATACCATAC AGGAAAGTCC AGACGAACTC CTTCGTCGTC TTGAGTACAG GCGAACCTTC AATGGCCTGA CCAGCACCTT AATTAACCTG CCTTTTTCGC AACTCGACGA GTTTTTGCTC AACGCCCTGG AACAAATGGG GCGGTATACC GGAGCTGATC GCTGTTATAT GTTCAGGTAT TCAGCATCGG ACCACGAGAT GAGCTGTACC CACGAATGGT GTGCAACAGG TATTTTACCC CAGCAGGAAA TGTTGCAGGA CTTACCGGTT AGCCTATTTC CGTGGTGGCA CCAGAACATG GTACGTGGTG AAACCATCTG CCTGTACTCG CTGGAAGACC TGCCCGCTGA GGCTCAGGCG GAACGAGACA TATTGGCCGA TCAGCAAATT CTATCCCTGC TGGTCATTCC AATTATGATG GAACAGCGCC CTCTGGGGTT TATCGGGTTT GATGCGGTTA CGGAAGCCAG GCATTGGAAT AGCGAGGATG TCGAATTGCT GGAAACGTTC TCCCAACTGT TAGTCAATAC CTTAAAGCGA TTCTCACATG AGCAGTCGAT CATTACGTTC AGTCGACGGG AATCGATCAT GAATCAGATT CACGAAACCT TGCTGGCTCG TGAAGTCACT CCATTCGGTG CGCAATTGCA GGTATTGCAC CATCTGTATA CGCTTATACC GGCTGAGTTG ATGGCTATAT ACAATGTGGC AGAAGAACCA CCGCTTGCCG TCGCTACCAG CTGGCTAATA AGTGGAAATG CCACGAGTGA GTTCGATACA CGTTATCCCG AAACGATACC TTTACAGAAC TGTTCCGAAC ATGAACGGGC CCAATTCCTA TCAGCAGCGG TAAAGGCCGG GCGGGCCTGC GAGTCGGTAT GCTGCCTACC TATTCAGCAG GAGAGCCGAC TGTTGGGGTA CCTCCTGATT GCCGACCCAC GCAGACACCT GTTAACCCAG GACGATCTGG CACTTCTTCA ACGGGCGGCC TATCTGCTGG CCGACTTCCG GGTCCGAAAA GAATTGGTGG AACAGCTACA GGTGCAGACT AATCAACTGA CCGAGACCAA CCAGCTCTTA TCGGCAATCG TAGAAAGTAC CCCTGTCGGC CTTGCGTTGT TCAGCCCCAA ATGGCAGCAT GACCGGATTT ATGACTTTGC GTATCAGTTT ACCAACCCGG CCAATGTCAG GCTTACCGGC CGCAGCCTCG ACCAGATGAG AGACAACACC TTGTTGACGC TCTTTCCCGA AATAAACCAG GGAGGGTTGT TTGACAAACT GGTTCAGACC GCACTTACCG GGCAGGCCCA GCATTTTGAT GAATACATTC GTCATGATGG GATGCGTATG TGGGCTTACT TTACGCTCAT CCGGATTGGA CAGGATGTTC TTTTTACCGT GCAGGATATT ACTCCGCAAA AAGAAGCAGA AGAACTCCTG CGCCATCAAA ACGAACTACT GGAAAAGCAG GTTGAGCTAC GAACCAACGA AATCAGGCAC CTGAATGCGC TTCAGAAAGC CATCATCAAT TACGCTGCGC TGGGATTTGC CGCAACAGAT ACACAAGGAA TTATTCAGCT GATAAACCCG GCTCTGGAAG TAATGACGGG GTATAAAGCC CATGAATTGG TCGGCAAGGT CTCTCCCGGC GTGCTTCGGG CTCCCCAAAC GCACCAGCGG CTAATTCAGC AGCTTACTCC CCACCTGGAC GATCCAACAC TGGAGGGTGA TGCGCTTGTA ACGGCCTATG TCCAGGAACA TACTTTTTTA CAACGGGAAA ATACGCTCCA GCATAAAGAT GGCCATCTGC TACCGGTTCT CTCAACGGTC AGCGGTTTAT ATGACGAGCA GGGAGTATTG CTGGGGTATG TTGATTTTGT AACGGATATC TCGGTGTTTA AACAGGCGCA GGAAACAGCA AAGAAAGCCT ACCACCGGCT TCAGTTAGCT GCCGATACGG CCGGACTAGG CATTTGGGAA TATGACCTGG CGACAGAAAA GTTCAGTCTG GACGACCAGA TGTACCGTAT CTGTGGCATC GATAACCAGC ACATGCCGCT TGACGCGGAA CTGTTCAGCA ACCTCATTCA CCCCGCTGAC CGGGAACGCT TTCAACAGGC AAAGTCATAT GCACTGGCGA ACAAGCTAAC CAGTAGTCTT AATTTTCGTC TGCTGCAACC CAGTGGGCAG CTTGTTTACG GCGAAATGCG CATGCAGCCC CTGCTGGATG AGCACCAGCA GCCGATTCAG TTAATTGGCG TCGTGCAGGA CCGAACGGCT CAACGACAAA CGGAACTGGC GCTTCAGCGA AGCAAGGAAC GGTATCTGGC TTTAGTTAAC AACCTGCATG AAATTGTTTT CCAGATAGAT TTAACCGGGT CGTTCACCTT CCTGAATAAC GCCTGGACCG AAACGATTGG TTACCCGCTG GCAGATTCTA TCGGTCAATC CATTCTTTCA TTTCTTTCTC CCGCCGATCA TCAGGTATGT AGCCAGTTGA TCGATCAGTT GGTGACTAAA GAAACGCAGC TCTGCCAAAA GACAGTTGCA TTTATTGCTC AGAATGGCGA AACAAAAATA GCCGAAGTGG ATGCCCGGCT CCTGACCGAC GCACAGGAGT TACCGATAGG CATAACTGGC ACATTCCGGG ATGTGACGCA ACAAAACAAA GCTACCGATG CGCTGCGGCA AAGTGAACAG CGCTTCAAAG CCATTTTTAA TTCGACCTTC CAGATGATAG GACTCCTCTG CCCGCAGGGG ACTATCCTCG AAATGAATGA TACCGCCTGT CTGGCATCTG GAAAAAGCAT GGATGAACTG GCCGGTAAGT ACCTGTGGGA AACGTATTGC TGGCAACTCT CACCGGCGAT CTGGCAAAAA TGCCGGGCAG CCGTTACCAG GGCGGCAGGC GGAGAACCCG TAAATTACGA AACCAACATT TGGCTGGCGG GTCAAACGGT AGTTCCCATC GACTTTTCGG TACGGCCATT GTTCAACGAT GCCGGAGAGG TTGTGCTGTT GATTGTGGAA GGACACGACC TGTCCAGTTA CAAGCAGATG CAGCAGGCGT TACAGGAAAG TGAGCAACGC TTCCGGGAAA TTGCCGAGAA AGTAGACTCT CTGTTCTGGA TTCGGGAAGG CGGATCGCCC CGGTTCAGCT ACGTCAACCC CATGTATGAA CGCATAACGG GAAGGTCCTG TGAAAGCTTA TATGAGGACC CAACTTCGTT TCTGGACTTT GTAGTGGAGG AAGACAGGCC CATGCTTCTA CAGCTTTTAA AGTTGGACCA GCCTTATGAC GGCCCGATTC ATTTCCAGGC CAGAATAGCC GGTAAAATCC GCTGGTTTGA AATCCGGGGC TTTTTCACTA AAGATGCAAC TGGTAAAGTA GTGAGGCATA TTGGAGTTGG CCAGGATGTG ACCAGTCAGA TGGAGAATAA ACAAGTGATG GAAGCAGCCC TTGAACGGGA GCAAGCCCTG AACAAGCTTA AATCCCTGTT TGTGTCCATG GCCTCGCACC AGTTTCGAAC ACCTCTGATG ACCATTCAGT CCAGCTCAGA ATTAATTGAG TTTTTAGTTA ACCAGGATAA TACCGACCAA AAGCCAGCTG TGCAGCGCCA CCTGCACCGA ATTAAGGGGG AAGTCGGGAA ATTAACTAAT ATTCTGGCCG ACATTCTGTT GTTGGGTCAG TCGGACTCCG GCAAGATTTC TATGCAGGCC GAACAGGTGA ATCTGTTGCC CTATATTACC CAGATTCGGG ATGACTATTT TTCCACTGGG TTAGGTCAAC GGCGTGTTCT GATCCAGGCC AATGAACAGG ACTACTGGGC TGCTGTCGAC AGAAAGCTAA TGAGTCACGT ACTACAGAAT CTGTTGACAA ATGCCACGAA ATATTCTAAG GGCGATCCCC TGATTCGACT CACTCAAACG GAGCAAACGA TCCAACTAGA GGTAATCGAT GATGGTATTG GTATCCCAGC CGGGGAGTTG CCCCTTTTGT TTGATTCTTT TTTCCGGGCC AGTAACGCCC GCCAGTTTCA GGGAACAGGC TTAGGCCTGT CGATCGCCCG TCAGTTTGTC GAACTGCATA ATGGCACCAT AACCGTACAA AGTGAAGTAG GGAAAGGGAC AACGTTTACA GTTACCTTAC CAGCCGGAGA GCCCCCCTTG TCAGATGCTG TTTGA
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Protein sequence | MYLEGVFFPD NKLADLRISW TSSGELTGTI LSEFISKEVL SSLCFNLTHR NSACLNLSND NSLQGVWQIA PVKEGYLATF QAHKTNYNQE NTIQESPDEL LRRLEYRRTF NGLTSTLINL PFSQLDEFLL NALEQMGRYT GADRCYMFRY SASDHEMSCT HEWCATGILP QQEMLQDLPV SLFPWWHQNM VRGETICLYS LEDLPAEAQA ERDILADQQI LSLLVIPIMM EQRPLGFIGF DAVTEARHWN SEDVELLETF SQLLVNTLKR FSHEQSIITF SRRESIMNQI HETLLAREVT PFGAQLQVLH HLYTLIPAEL MAIYNVAEEP PLAVATSWLI SGNATSEFDT RYPETIPLQN CSEHERAQFL SAAVKAGRAC ESVCCLPIQQ ESRLLGYLLI ADPRRHLLTQ DDLALLQRAA YLLADFRVRK ELVEQLQVQT NQLTETNQLL SAIVESTPVG LALFSPKWQH DRIYDFAYQF TNPANVRLTG RSLDQMRDNT LLTLFPEINQ GGLFDKLVQT ALTGQAQHFD EYIRHDGMRM WAYFTLIRIG QDVLFTVQDI TPQKEAEELL RHQNELLEKQ VELRTNEIRH LNALQKAIIN YAALGFAATD TQGIIQLINP ALEVMTGYKA HELVGKVSPG VLRAPQTHQR LIQQLTPHLD DPTLEGDALV TAYVQEHTFL QRENTLQHKD GHLLPVLSTV SGLYDEQGVL LGYVDFVTDI SVFKQAQETA KKAYHRLQLA ADTAGLGIWE YDLATEKFSL DDQMYRICGI DNQHMPLDAE LFSNLIHPAD RERFQQAKSY ALANKLTSSL NFRLLQPSGQ LVYGEMRMQP LLDEHQQPIQ LIGVVQDRTA QRQTELALQR SKERYLALVN NLHEIVFQID LTGSFTFLNN AWTETIGYPL ADSIGQSILS FLSPADHQVC SQLIDQLVTK ETQLCQKTVA FIAQNGETKI AEVDARLLTD AQELPIGITG TFRDVTQQNK ATDALRQSEQ RFKAIFNSTF QMIGLLCPQG TILEMNDTAC LASGKSMDEL AGKYLWETYC WQLSPAIWQK CRAAVTRAAG GEPVNYETNI WLAGQTVVPI DFSVRPLFND AGEVVLLIVE GHDLSSYKQM QQALQESEQR FREIAEKVDS LFWIREGGSP RFSYVNPMYE RITGRSCESL YEDPTSFLDF VVEEDRPMLL QLLKLDQPYD GPIHFQARIA GKIRWFEIRG FFTKDATGKV VRHIGVGQDV TSQMENKQVM EAALEREQAL NKLKSLFVSM ASHQFRTPLM TIQSSSELIE FLVNQDNTDQ KPAVQRHLHR IKGEVGKLTN ILADILLLGQ SDSGKISMQA EQVNLLPYIT QIRDDYFSTG LGQRRVLIQA NEQDYWAAVD RKLMSHVLQN LLTNATKYSK GDPLIRLTQT EQTIQLEVID DGIGIPAGEL PLLFDSFFRA SNARQFQGTG LGLSIARQFV ELHNGTITVQ SEVGKGTTFT VTLPAGEPPL SDAV
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