| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0559 |
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| Symbol | |
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| ID | 8724287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 689523 |
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| End bp | 691049 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003385422 |
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| Protein GI | 284035492 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAAA CAGCTAGTCC GGTTATGGTC CCCTTCAAAT CCCTGATTCA ATTTGATAAG
GCGTCATCCA CGCCCGTTTT CATTCAACTG AGCAACCAGC TTGGCCACCT CATCCGGCAG
GGAACCCTCG CGCCGGGGCA ACGGCTTCCC GGTACCCGCC AACTCGCCGA CCTGCTGGAG
CTGAATCGAC AAACCATCGT GGCTGCCTAC GAGGAAGGTC TGGCGCAGGG CTGGCTCGAA
AGCCGGTCGG GCAGCGGGAC GTATGTGGCC ACCCATTTCC CGGAGATAAA GCCGCAGGGG
TTAGCGGGCG CAACGGATGA TTCGTCTGCC ACAAACAGCG TGTCTGCCGG GAGCAGGCCC
GGTAATGAGC AACCGGGTTA CGCGTTTGAA TCGGTAGATT TTCTGGTGCG GCCGGTACTA
ACTAATCAGG CCGGGCTGCG CCTGGACGAC GGGTTTCCCG ATATTCGGCT GGCCCCGATG
GAGGAACTGA GCCGGGCATA TCGGTCGTAT TTTCGCTGGG GCAACCCGCA GCAGCATTTC
GGCTATAGTG ACACCAAAGG GCATCCGCTG CTCCGGGAGC AATTGTCGGC TTACCTGAAC
GAAACCCGTG GCCTGCAAAC CACGCCGGAG AACGTGCTGA TAACCCGTGG GAGCATCATG
GGCCTTCATC TGGCCAGTCA GGTGCTTTTG CGGCCGGGCG ATGTAGTTGC GGTGGGCGAA
ACAACCTGGT CGGGGGCGAC CATGAATTTT AAGAAAACGG GGGCAACGGT GTTGACCGTA
CCCGTCGATC AGTATGGGCT GGATGTGGAC ACGCTGGAAA CAATTTGCCG GACCAGGCAA
ATCCGGATGG TGTTCGTAAC GCCCCACCAT CATTACCCCA CCACCGTAAC CCTCCGCGCC
GACCGGCGTA TCAAGCTGTT ACAACTGGCC GAAGCGTATC GTTTTGCAAT TCTCGAAGAT
GACTACGATT ACGATTTTCA CTACCTCAGT CGCCCTATTC TGCCCCTCGC CAGCGCCGAC
CGGCGGGGCA TGGTCGTGTA TGTGGGTTCG CTGACGAAAT CCGTGGCACC CGCGTTTCGG
GTGGGGTACG TAGTGGCGCC CAAAGTTCTG ATTGACGAAC TGGCGCGGCA CCGGCGCATC
ATCGACCGGC AGGGCGATCC GATGCTTGAG TTCGCCATTG GACAGCTGTT TAAAACCGGA
GATATGAAAC GGCATTTTCG CAAGACCCTG CGAGCCTACC ACGCCCGGCG CGATTATTTC
TGCGATCTGC TGGCGAATGC GTTGCCGGAC GTTGTTCAAT TCAATAAACC CGATGGCGGG
CTGGCGGTCT GGGCTTCCTT CGATCCGGCT ATTGATATGG AATCATTGAC CGAACAGGCG
GCACAGGATG GGCTGTATTT GTCAAACGGC TTGTTTCATA ACCCACTCGG ACAACGGCTG
AACAGCACCC GGCTGGGCTT TGCGTCGAGT TCAGAGGCAG AACTGGAGCG GAGCGTGGCA
GTGCTGAAAA AGGTGGTTCA TGCATAA
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| Protein sequence | MDKTASPVMV PFKSLIQFDK ASSTPVFIQL SNQLGHLIRQ GTLAPGQRLP GTRQLADLLE
LNRQTIVAAY EEGLAQGWLE SRSGSGTYVA THFPEIKPQG LAGATDDSSA TNSVSAGSRP
GNEQPGYAFE SVDFLVRPVL TNQAGLRLDD GFPDIRLAPM EELSRAYRSY FRWGNPQQHF
GYSDTKGHPL LREQLSAYLN ETRGLQTTPE NVLITRGSIM GLHLASQVLL RPGDVVAVGE
TTWSGATMNF KKTGATVLTV PVDQYGLDVD TLETICRTRQ IRMVFVTPHH HYPTTVTLRA
DRRIKLLQLA EAYRFAILED DYDYDFHYLS RPILPLASAD RRGMVVYVGS LTKSVAPAFR
VGYVVAPKVL IDELARHRRI IDRQGDPMLE FAIGQLFKTG DMKRHFRKTL RAYHARRDYF
CDLLANALPD VVQFNKPDGG LAVWASFDPA IDMESLTEQA AQDGLYLSNG LFHNPLGQRL
NSTRLGFASS SEAELERSVA VLKKVVHA
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