Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0542 |
Symbol | |
ID | 8724270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 663574 |
End bp | 664566 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003385405 |
Protein GI | 284035475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGCTA ATCATAATCC GTTCGCAGGA CGGAAATCAT CGTTGCTTGT AGCCTTGCTG GTCTGGTTGA CAGTTTCTTT TTCAGCATGT AATGAAGCAG ACAAAAACAC CCCTACTTTC CCCACAATTG GTGAGATTGT TAATACGGGC AGTCGGTTTA CCTTGTTAAA AGCAGCCCTG CTTCGGGCCG GTCTGGATGG GGTAATGGCT CAGCCCGGCA CCTACACGGT ATTTGCCCCA ACAGACGATG CTTTCAAGGC ATTTGGGTAT GTAGATGCTG CCGCGATTAA CGCGGCTCCT GTCGAGTTAC TAAAAACGGT ATTGCAGTAC CACGTTCTGG GTGCCCGGGT TCCCGCGTCG GACATACCAA CGGCGATCAA TACTGCTCAG CCAACACTGT CGGGTTTGCC CGTATACATA TCGAAAGTTG CATCGGGCAC CGGTACATCA TCGGTTGTGT CAGTCAACGG GGCCCGCGTT TTACAGGCCG ACGGACAGGC TAGTAATGGG GTTGTTCATG CGATTGACCG CGTACTGCTG CCGCCCGTTT TCGGGAATGT AGCCGCTACT GTTCAGGGCA TTCCCACGCT GCTGCCGACC GCTTCGTTTA AGCTTCTGCT GGCCGCAGTC ACAAAAACAG GTATTGGTGG AGCACTGACC GGGCCAGGGC CACTAACAGT ATTTGCACCG ACCGATGCCG CCTTTAAAGC AGTGGGTATC GACTCTACCG TGATTGCCAA TACATCAGCA ACGGTTTTAA CCGGTATTCT TACCTATCAC GTGCTTAGCA GCCGTACCTA TACACCTCTT GTTACGAACG GAGCCAGCCT GTCTACGCTA CAGGGTGGAA CCATCACGGC GGGTGCCAGC ACAACGGGTA TAACCGTTAC GGGGAAAGGA AATATGGGCG TAGCGTCCAA TATTACCGGT CCCGATATTA CGGCTACGAA CGGTGTTGTA CACATCATCG ACCGCGTTTT ATTGCCTCAG TAG
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Protein sequence | MLANHNPFAG RKSSLLVALL VWLTVSFSAC NEADKNTPTF PTIGEIVNTG SRFTLLKAAL LRAGLDGVMA QPGTYTVFAP TDDAFKAFGY VDAAAINAAP VELLKTVLQY HVLGARVPAS DIPTAINTAQ PTLSGLPVYI SKVASGTGTS SVVSVNGARV LQADGQASNG VVHAIDRVLL PPVFGNVAAT VQGIPTLLPT ASFKLLLAAV TKTGIGGALT GPGPLTVFAP TDAAFKAVGI DSTVIANTSA TVLTGILTYH VLSSRTYTPL VTNGASLSTL QGGTITAGAS TTGITVTGKG NMGVASNITG PDITATNGVV HIIDRVLLPQ
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