Gene Slin_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0530 
Symbol 
ID8724258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp651031 
End bp651375 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID 
Productthioredoxin 
Protein accessionYP_003385393 
Protein GI284035463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.303131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.878071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG GAACACATGC CGTAGAAGCA ACCGACGCGA ACTTCAACGA TCTTATAAAT 
TCTGACAAAC CTGTTTTAGT AGATTTCTGG GCCGAATGGT GCGGTCCCTG TAAAATGATC
GGGCCAGTTG TTGAGCAACT TGCCGGTGAA TACGAAGGGA AAGCCGTAGT AGCGAAAATG
GACGTTGATC AAAACTCCCA GGTTCCCGCT AAATTTGGTA TCCGCAGCAT TCCGACGCTG
ATGATTTTCA AAAACGGTCA GTTAGTAGAT AAAGTGATTG GCGCCGTCCC CAAAAACGTA
CTGGAGCAAA AACTTCAGGG CGCAATGGAA CCCGCAACGA TCTAA
 
Protein sequence
MAAGTHAVEA TDANFNDLIN SDKPVLVDFW AEWCGPCKMI GPVVEQLAGE YEGKAVVAKM 
DVDQNSQVPA KFGIRSIPTL MIFKNGQLVD KVIGAVPKNV LEQKLQGAME PATI