Gene Slin_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0526 
Symbol 
ID8724254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp645432 
End bp646496 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385389 
Protein GI284035459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000520001 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAC GTTTTATTTG GTTGCTAACT TTTACAACTT TTTTTTTCGT CAACTACATG 
ACGGCTAGCT ATGGCAGAGC TGAAAAAACT GCTAAAGAAT TGTTGGTGAG TAGGGTTGCT
GGCTCGAAAT ATCCAGTTTG GCAGCGTCCA CTGTGGGGCT TCTTTGCGCA TCAGCAGATC
AATCGGCTGG CTGTATTTAC GCTGCCGGTC GATATGATCC CATTCTTTAA AAAGCACATT
AACTTTCTAT CCGACAATGC AGTCAATCCC GACAAGCGCC GGTATGCGGT TGTGGGCGAA
GCACCACGCC ATTTCATTGA TCTGGATGCT TATCCGGATA CAACAAGCGC TACCTTGCCC
CGGTATTATA AGGAGGCTAC AGATCGATAT GGAGAAGACT CGCTAGCGTT GCATGGGCTA
GTCCCCTGGC AAATTCAACT CACAAAGTAC CAGTTAACGG AAGCGTTTAA ACAGCGTAAT
GTACGGCGTA TTCTGCGCGT AGCCGCCGAT TTGGGTCACT ACATTGCCGA TGCCAATGTG
CCTTTGCATA CAACCCGCAA CTACAACGGT CAGTTAACCA ATCAACAGGG TATTCATGGT
TTCTGGGAGT CGAGGCTTCC CGAGCTGTTC AGTGCCAACT ATGATTTTCT GACGGGACAG
GCGGAGTATA TTTATTCTCC CCAAAAAGCC GCCTGGCGGG CTGTGTTCAA TGCTAATGCG
GCTCTGGACT CCGTATTGCA TATTGAACGG CAGTTAACGG AGCAGGTAGG GGAGACCCGT
AAATATGGTT TTGAGGAGCG AAACGGAATT ACCGCCAAGG TCTATTCGGC CGATTTCTCG
CAACAGTACC ACGAACGGTT ACATGGTCAG GTAGAGCGTC AGATGCGGGC ATCCGTAAAG
ATGGTCGGCG ATTTCTGGTA TACCTGCTGG GTCGATGCCG GTCAGCCGGA TTTACGGGCT
TTGGCAAACT ACCAACTTAC TGATCAGGAG CAGAAGGAGG AAGTAGACGA ACAGAAAGGG
TGGTTGAAGC GGCTGTTTAA GGCGAGGGAG GAATCCGAAC CGTGA
 
Protein sequence
MYKRFIWLLT FTTFFFVNYM TASYGRAEKT AKELLVSRVA GSKYPVWQRP LWGFFAHQQI 
NRLAVFTLPV DMIPFFKKHI NFLSDNAVNP DKRRYAVVGE APRHFIDLDA YPDTTSATLP
RYYKEATDRY GEDSLALHGL VPWQIQLTKY QLTEAFKQRN VRRILRVAAD LGHYIADANV
PLHTTRNYNG QLTNQQGIHG FWESRLPELF SANYDFLTGQ AEYIYSPQKA AWRAVFNANA
ALDSVLHIER QLTEQVGETR KYGFEERNGI TAKVYSADFS QQYHERLHGQ VERQMRASVK
MVGDFWYTCW VDAGQPDLRA LANYQLTDQE QKEEVDEQKG WLKRLFKARE ESEP