Gene Slin_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0517 
Symbol 
ID8724245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp637143 
End bp637646 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRad52/22 double-strand break repair protein 
Protein accessionYP_003385380 
Protein GI284035450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.743906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAA ACGTATTAAC AGCCCCCCTC ACCATACACG AGATTGAGTG GCGGGTGCAG 
AGCCAGACAA AAGATGGTCA GAAGATCGTC GTCGTGCCGT ACATCACAAA CCGATGTGTC
ATGCAACGGT TTGACGAGCA GTTCGGCTGG GCGGGTTGGC AAAATGAAAT CAAGGAAATA
GAAGGCGGTT TTTTGTGTAC AATTACTGCA GTATTGCCCG GTGGCGAAAT TGTTCGCAAA
ACCGATGGTG CCAGCCGTAC GAGTGTGGAA CCCGTGAAAG GGGGTATCAG CGACGCTATG
AAACGATGTG CGGTACAGTT CGGTCTTGGT AGGGCACTGT ACGATTTTCC GAAAGTGCTG
GTCGAAACAA CGGACAAATA CATTCCCAAC TGGGCCACCC CTTTGCTCGA TAAAATGGTC
GAGAAAATCA ATGCTGGCGG CACCGTTCGC GATGTGGTGG TATTAAAACC CGAACACGCT
AAACCGTCGG CGAAAGCAGC TTAG
 
Protein sequence
MELNVLTAPL TIHEIEWRVQ SQTKDGQKIV VVPYITNRCV MQRFDEQFGW AGWQNEIKEI 
EGGFLCTITA VLPGGEIVRK TDGASRTSVE PVKGGISDAM KRCAVQFGLG RALYDFPKVL
VETTDKYIPN WATPLLDKMV EKINAGGTVR DVVVLKPEHA KPSAKAA